RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
LMNA-203ENST00000368297 SIX4Q9UIU6 781 aa17.1■□□□□ 0.33
LMNA-203ENST00000368297 AGAP1Q9UPQ3 857 aa17.1■□□□□ 0.33
LMNA-203ENST00000368297 KIAA0100Q14667 2235 aaKnown RBP17.09■□□□□ 0.33
LMNA-203ENST00000368297 JAM2P57087 298 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 RBP5P82980 135 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 ARID5AQ03989 594 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 TOGARAM2Q6ZUX3 1019 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 REXO1L1PQ8IX06 675 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 KAT5Q92993 513 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 FAM81BQ96LP2 452 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
LMNA-203ENST00000368297 RSAD1Q9HA92 442 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
LMNA-203ENST00000368297 C9IYK1 514 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 F8VZ95 297 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 ASS1P00966 412 aaKnown RBP17.08■□□□□ 0.32
LMNA-203ENST00000368297 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
LMNA-203ENST00000368297 ZBTB6Q15916 424 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 RAD9BQ6WBX8 426 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 ENOSF1Q7L5Y1 443 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 TAF4BQ92750 862 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 SYN2Q92777 582 aaPredicted RBP17.08■□□□□ 0.32
LMNA-203ENST00000368297 KREMEN1Q96MU8 473 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
LMNA-203ENST00000368297 NUB1Q9Y5A7 615 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 ADGRG1Q9Y653 693 aa17.08■□□□□ 0.32
LMNA-203ENST00000368297 ARL5CA6NH57 179 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 PTGESO14684 152 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 GFPT2O94808 682 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 CXCL10P02778 98 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 PNMA6AP0CW24 399 aaPredicted RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 RAG1P15918 1043 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 FERP16591 822 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 ATICP31939 592 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 SOX5P35711 763 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 USP8P40818 1118 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 CDK17Q00537 523 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 GCNT1Q02742 428 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 MEA1Q16626 185 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 FAM43BQ6ZT52 329 aaPredicted RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 CHP1Q99653 195 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 ENPP3O14638 875 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 EOMESO95936 686 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 THP07101 528 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 TBXAS1P24557 533 aaPredicted RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 RFC2P35250 354 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 CYLC1P35663 651 aaPredicted RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 SCNN1GP51170 649 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 CUL2Q13617 745 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 ZNF667Q5HYK9 610 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 ZNF598Q86UK7 904 aaKnown RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 FMNL3Q8IVF7 1028 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 NIF3L1Q9GZT8 377 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 XYLT2Q9H1B5 865 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 SLC38A7Q9NVC3 462 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 AIPL1Q9NZN9 384 aa17.07■□□□□ 0.32
LMNA-203ENST00000368297 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
LMNA-203ENST00000368297 TRIM43BA6NCK2 446 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 FOXN3O00409 490 aaPredicted RBP17.06■□□□□ 0.32
LMNA-203ENST00000368297 KIAA0355O15063 1070 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
LMNA-203ENST00000368297 TIMP1P01033 207 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 SERPING1P05155 500 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 CYP3A5P20815 502 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 ETF1P62495 437 aaKnown RBP17.06■□□□□ 0.32
LMNA-203ENST00000368297 FAM189BP81408 668 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 KLHL30Q0D2K2 578 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 MTF1Q14872 753 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 SCARA5Q6ZMJ2 495 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 UBE2Q1Q7Z7E8 422 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 CXorf38Q8TB03 319 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 TRIM43Q96BQ3 446 aaPredicted RBP17.06■□□□□ 0.32
LMNA-203ENST00000368297 PPP1R10Q96QC0 940 aaKnown RBP17.06■□□□□ 0.32
LMNA-203ENST00000368297 DESI2Q9BSY9 194 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 GPR88Q9GZN0 384 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
LMNA-203ENST00000368297 EPN1Q9Y6I3 576 aaPredicted RBP17.06■□□□□ 0.32
LMNA-203ENST00000368297 CCDC172P0C7W6 258 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 KRT5P13647 590 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 KRT83P78385 493 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 WDR72Q3MJ13 1102 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 C9orf57Q5W0N0 161 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 GLB1LQ6UWU2 654 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 SHC3Q92529 594 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 ARID3AQ99856 593 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 DEF6Q9H4E7 631 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms