RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SLC12A4Q9UP95 1085 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 SPATA31C2B4DYI2 1134 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 ATP2A1O14983 1001 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 ABHD2P08910 425 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 SUPT20HL2P0C7V6 817 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 NAMPTP43490 491 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 LONRF1Q17RB8 773 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 SPRED3Q2MJR0 410 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 SUPT20HL1Q3ZLR7 823 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 CCDC60Q8IWA6 550 aaPredicted RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 RIBC1Q8N443 379 aaPredicted RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 DYDC1Q8WWB3 177 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 CGRRF1Q99675 332 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 ELAC2Q9BQ52 826 aaKnown RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 OSBPL8Q9BZF1 889 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 YY1AP1Q9H869 796 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 NINJ2Q9NZG7 142 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 TMEM120BA0PK00 339 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 NDC80O14777 642 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 SNX3O60493 162 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 RGS20O76081 388 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 VNN1O95497 513 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 CLTAP09496 248 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 RALAP11233 206 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 BACE1P56817 501 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 MAMLD1Q13495 774 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 STAT4Q14765 748 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 EMC2Q15006 297 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 SNCBQ16143 134 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 VSTM1Q6UX27 236 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 TRPM8Q7Z2W7 1104 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 CCDC91Q7Z6B0 441 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 RBM41Q96IZ5 413 aaKnown RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 C12orf42Q96LP6 360 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 R3HDM2Q9Y2K5 976 aaKnown RBP15.19■□□□□ 0.02
CD48-201ENST00000368045 PCDHB4Q9Y5E5 795 aa15.19■□□□□ 0.02
CD48-201ENST00000368045 TNS1Q9HBL0 1735 aaKnown RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 CDH16O75309 829 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 KCNA3P22001 575 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 GNA15P30679 374 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 AP3M2P53677 418 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 POLGP54098 1239 aaPredicted RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 DGKZQ13574 1117 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 LRRC38Q5VT99 294 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 DCAF15Q66K64 600 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 SNRNP48Q6IEG0 339 aaKnown RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 DRICH1Q6PGQ1 229 aaPredicted RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 GBP7Q8N8V2 638 aaPredicted RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 CKAP2Q8WWK9 683 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 TACO1Q9BSH4 297 aaKnown RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 PORCNQ9H237 461 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 PARVAQ9NVD7 372 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 HAUS2Q9NVX0 235 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 RBAKQ9NYW8 714 aaPredicted RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 IP6K2Q9UHH9 426 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 USP15Q9Y4E8 981 aaPredicted RBP15.18■□□□□ 0.02
CD48-201ENST00000368045 RIPK3Q9Y572 518 aa15.18■□□□□ 0.02
CD48-201ENST00000368045 O00370 1275 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 SUN1O94901 812 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 CALCAP01258 141 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 DPEP1P16444 411 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 DSG3P32926 999 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 RDXP35241 583 aaKnown RBP15.17■□□□□ 0.02
CD48-201ENST00000368045 IFNAR2P48551 515 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 NLRP11P59045 1033 aaKnown RBP15.17■□□□□ 0.02
CD48-201ENST00000368045 MCL1Q07820 350 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 NR1H3Q13133 447 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 KYNUQ16719 465 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 CCDC38Q502W7 563 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 IZUMO3Q5VZ72 239 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 HIBCHQ6NVY1 386 aaPredicted RBP15.17■□□□□ 0.02
CD48-201ENST00000368045 CRELD2Q6UXH1 353 aaPredicted RBP15.17■□□□□ 0.02
CD48-201ENST00000368045 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 ZCCHC9Q8N567 271 aaKnown RBP15.17■□□□□ 0.02
CD48-201ENST00000368045 RBBP8NLQ8NC74 664 aaPredicted RBP15.17■□□□□ 0.02
CD48-201ENST00000368045 DEPTORQ8TB45 409 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 FEZF2Q8TBJ5 459 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 C11orf70Q9BRQ4 267 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 CYP39A1Q9NYL5 469 aa15.17■□□□□ 0.02
CD48-201ENST00000368045 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.17■□□□□ 0.02
CD48-201ENST00000368045 A0A0B4J269 797 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 MGRN1O60291 552 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 LSM8O95777 96 aaKnown RBP15.16■□□□□ 0.02
CD48-201ENST00000368045 KLRC2P26717 231 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 PTPN7P35236 360 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ARL2P36404 184 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 COPS2P61201 443 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 GRM1Q13255 1194 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 MTERF2Q49AM1 385 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 PPP1R21Q6ZMI0 780 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 ARHGEF18Q6ZSZ5 1173 aa15.16■□□□□ 0.02
CD48-201ENST00000368045 RPAINQ86UA6 219 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms