RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 PCYOX1Q9UHG3 505 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 GJD2Q9UKL4 321 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 PRDM4Q9UKN5 801 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 SCINQ9Y6U3 715 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 CNTNAP2Q9UHC6 1331 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 MCM3APO60318 1980 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 ZSCAN5CA6NGD5 496 aaPredicted RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 MSCO60682 206 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 CYP1A1P04798 512 aaPredicted RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 PRKCBP05771 671 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 MAN1A1P33908 653 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 PEX5P50542 639 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 YWHAEP62258 255 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 NOP14P78316 857 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 MCL1Q07820 350 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 LAMTOR4Q0VGL1 99 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 NCOA4Q13772 614 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 LY6KQ17RY6 165 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 MCOLN2Q8IZK6 566 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 TSEN2Q8NCE0 465 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 FAXDC2Q96IV6 333 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 ZIM3Q96PE6 472 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 PI4K2AQ9BTU6 479 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 NFKBIZQ9BYH8 718 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 TMEM110-MUSTN1A8MSY1 372 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 VNN1O95497 513 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 ITGA4P13612 1032 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 PSMC4P43686 418 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 FNTAP49354 379 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 IRF5Q13568 498 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 CYP1B1Q16678 543 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 CCDC62Q6P9F0 684 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 MAML3Q96JK9 1138 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 ACO2Q99798 780 aaKnown RBP14.96□□□□□ -0.01
USF1-202ENST00000368020 HINFPQ9BQA5 517 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 ERP44Q9BS26 406 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 TCHPQ9BT92 498 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 HAPLN2Q9GZV7 340 aa14.96□□□□□ -0.01
USF1-202ENST00000368020 HMGB1P1B2RPK0 211 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 GPR25O00155 361 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 MYO1FO00160 1098 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 TTI1O43156 1089 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 LSM8O95777 96 aaKnown RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 GNRH1P01148 92 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 FAM153BP0C7A2 387 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 ACO1P21399 889 aaKnown RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 ECHS1P30084 290 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 GNA15P30679 374 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 RGS2P41220 211 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 GUCY2FP51841 1108 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 GYS2P54840 703 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 PTP4A2Q12974 167 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 PLCB4Q15147 1175 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 DUOXA2Q1HG44 320 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 FAM153CQ494X1 144 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 C12orf50Q8NA57 414 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 BEGAINQ9BUH8 593 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.95□□□□□ -0.02
USF1-202ENST00000368020 ERAP1Q9NZ08 941 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 FAM153AQ9UHL3 310 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 PCDHB4Q9Y5E5 795 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 ACKR2O00590 384 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 SHOX2O60902 331 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 IL18RAPO95256 599 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 ASS1P00966 412 aaKnown RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 TXNP10599 105 aaKnown RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 CTGFP29279 349 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 LAMC2Q13753 1193 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 KYAT1Q16773 422 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 SGSM1Q2NKQ1 1148 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 ZNF484Q5JVG2 852 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 DUPD1Q68J44 220 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 MPZL3Q6UWV2 235 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 TSHZ1Q6ZSZ6 1077 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 MON1BQ7L1V2 547 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 ARMCX2Q7L311 632 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 EEPD1Q7L9B9 569 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 PHF13Q86YI8 300 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 DNAJC5GQ8N7S2 189 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 RNF149Q8NC42 400 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 ZBTB45Q96K62 511 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 FMO2Q99518 471 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 APBA2Q99767 749 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
USF1-202ENST00000368020 FEZ2Q9UHY8 353 aaPredicted RBP14.95□□□□□ -0.02
USF1-202ENST00000368020 ERICH4A6NGS2 130 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 MAGEB2O15479 319 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 FAM189A1O60320 539 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 ARIH2O95376 493 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 IGHA2P01877 340 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 EIF3BP55884 814 aaKnown RBP14.94□□□□□ -0.02
USF1-202ENST00000368020 ARHGEF6Q15052 776 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 HSDL1Q3SXM5 330 aa14.94□□□□□ -0.02
USF1-202ENST00000368020 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms