RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 UPP1Q16831 310 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 KMT5BQ4FZB7 885 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 ARMCX5Q6P1M9 558 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 CD300LGQ6UXG3 332 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 CRELD2Q6UXH1 353 aaPredicted RBP15.93■□□□□ 0.14
SF3B5-201ENST00000367569 KRBA2Q6ZNG9 492 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 SPATA31D4Q6ZUB0 917 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 ERCC4Q92889 916 aaPredicted RBP15.93■□□□□ 0.14
SF3B5-201ENST00000367569 PYM1Q9BRP8 204 aaKnown RBP15.93■□□□□ 0.14
SF3B5-201ENST00000367569 SORCS3Q9UPU3 1222 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 PCDHB13Q9Y5F0 798 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 DENND4AQ7Z401 1863 aa15.93■□□□□ 0.14
SF3B5-201ENST00000367569 FAM237AA0A1B0GTK4 181 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 CLIC2O15247 247 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 TEX28O15482 410 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 GADD45BO75293 160 aaPredicted RBP15.92■□□□□ 0.14
SF3B5-201ENST00000367569 AVPR2P30518 371 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 CYP2J2P51589 502 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 EHHADHQ08426 723 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 TCF15Q12870 199 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 ALCAMQ13740 583 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 USP41Q3LFD5 358 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 LMBRD2Q68DH5 695 aaPredicted RBP15.92■□□□□ 0.14
SF3B5-201ENST00000367569 CNNM4Q6P4Q7 775 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 EPM2AIP1Q7L775 607 aaPredicted RBP15.92■□□□□ 0.14
SF3B5-201ENST00000367569 GPR149Q86SP6 731 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 EFCAB13Q8IY85 973 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 ZDHHC14Q8IZN3 488 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 KIAA0895Q8NCT3 520 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 SCFD1Q8WVM8 642 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 EMILIN2Q9BXX0 1053 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 SLC38A7Q9NVC3 462 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 STK39Q9UEW8 545 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 LIMD1Q9UGP4 676 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 STYXL1Q9Y6J8 313 aa15.92■□□□□ 0.14
SF3B5-201ENST00000367569 DMDP11532 3685 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 ADAM12O43184 909 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 ZNF202O95125 648 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 RPN1P04843 607 aaKnown RBP15.91■□□□□ 0.14
SF3B5-201ENST00000367569 SCP2P22307 547 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 ABCD1P33897 745 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 MCM4P33991 863 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 PTPN5P54829 565 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 DSG1Q02413 1049 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 PNOCQ13519 176 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 MTMR3Q13615 1198 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 PSMD5Q16401 504 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 KIAA0319Q5VV43 1072 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 SLFN12LQ6IEE8 588 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 STXBP4Q6ZWJ1 553 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 PALB2Q86YC2 1186 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 TDRD5Q8NAT2 981 aaKnown RBP15.91■□□□□ 0.14
SF3B5-201ENST00000367569 UROC1Q96N76 676 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 SFXN1Q9H9B4 322 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
SF3B5-201ENST00000367569 USTQ9Y2C2 406 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 NUB1Q9Y5A7 615 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 MTCL1Q9Y4B5 1905 aaKnown RBP15.91■□□□□ 0.14
SF3B5-201ENST00000367569 USP34Q70CQ2 3546 aa15.91■□□□□ 0.14
SF3B5-201ENST00000367569 MYO15AQ9UKN7 3530 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 EIF3DO15371 548 aaKnown RBP eCLIP15.9■□□□□ 0.147e-12■■□□□ 12.4
SF3B5-201ENST00000367569 ADRB2P07550 413 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 STK4Q13043 487 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 TMEM132DQ14C87 1099 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 SCARA3Q6AZY7 606 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 DCLRE1AQ6PJP8 1040 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 CBWD2Q8IUF1 395 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 UBALD2Q8IYN6 164 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
SF3B5-201ENST00000367569 PRRX2Q99811 253 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 TTPALQ9BTX7 342 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 TMEM206Q9H813 350 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 MAN1C1Q9NR34 630 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 CHST7Q9NS84 486 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
SF3B5-201ENST00000367569 HSPBP1Q9NZL4 362 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 USP25Q9UHP3 1055 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 UBQLN1Q9UMX0 589 aaKnown RBP15.9■□□□□ 0.14
SF3B5-201ENST00000367569 MAPK8IP1Q9UQF2 711 aa15.9■□□□□ 0.14
SF3B5-201ENST00000367569 TMEM189-UBE2V1I3L0A0 370 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 TGFB1I1O43294 461 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 CDR1P51861 262 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 DPYDQ12882 1025 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 KYAT1Q16773 422 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 BRSK2Q8IWQ3 736 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 SMYD4Q8IYR2 804 aaPredicted RBP15.89■□□□□ 0.13
SF3B5-201ENST00000367569 FMR1NBQ8N0W7 255 aaPredicted RBP15.89■□□□□ 0.13
SF3B5-201ENST00000367569 PLCD3Q8N3E9 789 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 PLEKHA5Q9HAU0 1116 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 RXFP1Q9HBX9 757 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 AGPAT3Q9NRZ7 376 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 CHMP5Q9NZZ3 219 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 TIMM13Q9Y5L4 95 aaPredicted RBP15.89■□□□□ 0.13
SF3B5-201ENST00000367569 UBE4BO95155 1302 aa15.89■□□□□ 0.13
SF3B5-201ENST00000367569 PTPRJQ12913 1337 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms