RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NAT9Q9BTE0 207 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 ARFGEF2Q9Y6D5 1785 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 CELF4Q9BZC1 486 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 Q4G0T1 1027 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 FAM102AQ5T9C2 384 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 EXD1Q8NHP7 514 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 LSM8O95777 96 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 OSBPP22059 807 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 CCDC138Q96M89 665 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 HEY1Q9Y5J3 304 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 KYNUQ16719 465 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 TMEM119Q4V9L6 283 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 PAGR1Q9BTK6 254 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 LOC102724159A0A0B4J2E5 919 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 NCOA4Q13772 614 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 PWP2Q15269 919 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 DDX42Q86XP3 938 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 MTMR8Q96EF0 704 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 F8W8V4 182 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 EXTL3O43909 919 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 LRRN4CLQ8ND94 238 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 WDR46O15213 610 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 OATP04181 439 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 APOA4P06727 396 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 STIP1P31948 543 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 C16orf89Q6UX73 402 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 LRRC6Q86X45 466 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 OR2W6PQ8NHA6 318 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 TTC8Q8TAM2 541 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZNF518BQ9C0D4 1074 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 RNF146Q9NTX7 359 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 SRGAP2CP0DJJ0 459 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 RFC5P40937 340 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 MAML3Q96JK9 1138 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 EML4Q9HC35 981 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 TYW5A2RUC4 315 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 MTSS1O43312 755 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 ECE2O60344 883 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 KCNA3P22001 575 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 TYK2P29597 1187 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 RABGAP1LQ5R372 815 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 MANSC1Q9H8J5 431 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 NID2Q14112 1375 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 SLC37A4O43826 429 aa12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 TTC39BQ5VTQ0 682 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-202ENST00000366764 LAMA4Q16363 1823 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 DRG2P55039 364 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 SCFD1Q8WVM8 642 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 INTS13Q9NVM9 706 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 H2AFYO75367 372 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 ITKQ08881 620 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 PRUNE1Q86TP1 453 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 TOPAZ1Q8N9V7 1692 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 CFLARO15519 480 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 DBR1Q9UK59 544 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 EEF1B2P24534 225 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 AMPD2Q01433 879 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 PTK7Q13308 1070 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZNF507Q8TCN5 953 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 VCPIP1Q96JH7 1222 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 GAS2O43903 313 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 APBA3O96018 575 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 BMP6P22004 513 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 STX3Q13277 289 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZBTB22O15209 634 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 PRKCIP41743 596 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 APOEP02649 317 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 LRRC34Q8IZ02 419 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 VGLL2Q8N8G2 317 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 FAM167BQ9BTA0 163 aa12.4□□□□□ -0.42
CDC42BPA-202ENST00000366764 H3BRJ5 948 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 KRT16P08779 473 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 CIITAP33076 1130 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 CDC42EP1Q00587 391 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 TKFCQ3LXA3 575 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 CCNJLQ8IV13 435 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 SPATA18Q8TC71 538 aa12.4□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZBTB18Q99592 522 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms