RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 BACH1O14867 736 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 TEX33O43247 280 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 CALUO43852 315 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 B4GALT3O60512 393 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 GCNT3O95395 438 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 MYBP10242 640 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 SRFP11831 508 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ALDH7A1P49419 539 aaKnown RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 CASP5P51878 434 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 MARSP56192 900 aaKnown RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 NFIL3Q16649 462 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 KIZQ2M2Z5 673 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 XKR3Q5GH77 459 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ANO5Q75V66 913 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 PLPPR4Q7Z2D5 763 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF720Q7Z2F6 126 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 PPFIBP1Q86W92 1011 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 CCDC60Q8IWA6 550 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 MAML2Q8IZL2 1156 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 DAW1Q8N136 415 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 SECISBP2LQ93073 1101 aaKnown RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 TMEM169Q96HH4 297 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 DRC1Q96MC2 740 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 TUBGCP2Q9BSJ2 902 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 STRA6Q9BX79 667 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 VPS16Q9H269 839 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF302Q9NR11 478 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 TAB2Q9NYJ8 693 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 A0A1W2PQC6 194 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 SPTLC1O15269 473 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 USO1O60763 962 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PPP1R37O75864 691 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 VTNP04004 478 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 CTSAP10619 480 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PLS3P13797 630 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 HOXD13P35453 343 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 DNM2P50570 870 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 STAT5BP51692 787 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 CRYBB1P53674 252 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 POLGP54098 1239 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 BCAR1P56945 870 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PRKCEQ02156 737 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF528Q3MIS6 628 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 C15orf39Q6ZRI6 1047 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF598Q86UK7 904 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 NELFCDQ8IXH7 590 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 SLC44A3Q8N4M1 653 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PJA1Q8NG27 643 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 GPR152Q8TDT2 470 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 C17orf75Q9HAS0 396 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 ARHGEF3Q9NR81 526 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PPME1Q9Y570 386 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 ASPMQ8IZT6 3477 aa12.22□□□□□ -0.45
CSNK1E-202ENST00000366216 CETN3O15182 167 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 NRDCO43847 1150 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 DGAT1O75907 488 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 C22orf31O95567 290 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 OATP04181 439 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 GLULP15104 373 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 RPL13P26373 211 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 NMT1P30419 496 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 NPEPPSP55786 919 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 LRMPQ12912 555 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 TRIM14Q14142 442 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 MAN2A1Q16706 1144 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 PLA2G4FQ68DD2 849 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 ARMCX5Q6P1M9 558 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 DDX53Q86TM3 631 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 ECHDC2Q86YB7 292 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 RNF169Q8NCN4 708 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 CCDC112Q8NEF3 446 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 KIFAP3Q92845 792 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF668Q96K58 619 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 CEP170P1Q96L14 293 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 MRPL9Q9BYD2 267 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 NIFKQ9BYG3 293 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 KCNG1Q9UIX4 513 aa12.21□□□□□ -0.45
CSNK1E-202ENST00000366216 COL1A2P08123 1366 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 TMEM150BA6NC51 233 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 LRRN2O75325 713 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 FGFR4P22455 802 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC26A2P50443 739 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 SNRPFP62306 86 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms