RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 SRSF4Q08170 494 aaKnown RBP3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 FAPQ12884 760 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 ZNF788Q6ZQV5 615 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 PEG10Q86TG7 708 aaKnown RBP3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 AFAP1L2Q8N4X5 818 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 OR2I1PQ8NGU4 316 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 SARAFQ96BY9 339 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 FBXL20Q96IG2 436 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 C7orf25Q9BPX7 421 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 C11orf54Q9H0W9 315 aaPredicted RBP3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 SLKQ9H2G2 1235 aaPredicted RBP3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 CPNE5Q9HCH3 593 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 KMT5AQ9NQR1 393 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 CDYLQ9Y232 598 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 ENTPD2Q9Y5L3 495 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 CCDC151A5D8V7 595 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 MAPK10P53779 464 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 ATP8B2P98198 1209 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 PREPLQ4J6C6 727 aaPredicted RBP3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 DACT2Q5SW24 774 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 TSTD2Q5T7W7 516 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 KAZNQ674X7 775 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 VWA1Q6PCB0 445 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 CLNKQ7Z7G1 428 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 RHOT1Q8IXI2 618 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 SH2D3CQ8N5H7 860 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 TOR1AIP2Q8NFQ8 470 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 NLGN4YQ8NFZ3 816 aaPredicted RBP3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 TFAP2BQ92481 460 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 TLR10Q9BXR5 811 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 INTS13Q9NVM9 706 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 TBX22Q9Y458 520 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 GPR45Q9Y5Y3 372 aa3.28□□□□□ -1.88
RNU4-42P-201ENST00000364738 WASHC2AQ641Q2 1341 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 PRAMEF33A0A0G2JMD5 474 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 MANSC4A6NHS7 340 aaPredicted RBP3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 PRAMEF10O60809 474 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 PRKD3O94806 890 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 SRGNP10124 158 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 KCNA2P16389 499 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 CPEP16870 476 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 ITGB6P18564 788 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 SLC6A4P31645 630 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 GRIA3P42263 894 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 RPS7P62081 194 aaKnown RBP3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 NBPF8Q3BBV2 869 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 KIAA0895LQ68EN5 471 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 PTF1AQ7RTS3 328 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 AMIGO2Q86SJ2 522 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 DCBLD1Q8N8Z6 715 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 Q8NA96 180 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 COG1Q8WTW3 980 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 LPIN2Q92539 896 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 ANKS1AQ92625 1134 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 DPF2Q92785 391 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 RAB24Q969Q5 203 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 TMX3Q96JJ7 454 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 SLC2A13Q96QE2 648 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 TIMP4Q99727 224 aa3.27□□□□□ -1.89
RNU4-42P-201ENST00000364738 KRTAP29-1A8MX34 341 aaPredicted RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 GRM6O15303 877 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 MPPED1O15442 326 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 PROM1O43490 865 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 AGFG2O95081 481 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 CHRM2P08172 466 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 MTHFD1P11586 935 aaKnown RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 WT1P19544 449 aaPredicted RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 ZNF81P51508 661 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 CTXN1P60606 82 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 EXOSC10Q01780 885 aaKnown RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 FPGSQ05932 587 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 ZNF844Q08AG5 666 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 CD300EQ496F6 205 aaPredicted RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 TSHZ1Q6ZSZ6 1077 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 LHFPL2Q6ZUX7 228 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 NOP9Q86U38 636 aaKnown RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 RSPH3Q86UC2 560 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 SPATS2Q86XZ4 545 aaKnown RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 AMOTL1Q8IY63 956 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 PPM1NQ8N819 430 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 SLC30A5Q8TAD4 765 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 MYCBPAPQ8TBZ2 947 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 HASPINQ8TF76 798 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 SCARB1Q8WTV0 552 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 NRG4Q8WWG1 115 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 SNX19Q92543 992 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 PACSIN1Q9BY11 444 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 ZNF277Q9NRM2 450 aaPredicted RBP3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 INTUQ9ULD6 942 aa3.26□□□□□ -1.89
RNU4-42P-201ENST00000364738 WIPF3A6NGB9 483 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 LINC00473A8K010 186 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 ADM5C9JUS6 153 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 TOR1BO14657 336 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 GPR39O43194 453 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 EYA4O95677 639 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 SBK3P0C264 359 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 AGXTP21549 392 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 GATA3P23771 443 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms