RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 RFFLQ8WZ73 363 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 NR1H4Q96RI1 486 aaPredicted RBP11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 SPATC1LQ9H0A9 340 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 EPB41L4AQ9HCS5 686 aaPredicted RBP11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 ZFATQ9P243 1243 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 FBXL21Q9UKT6 434 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 IQGAP3Q86VI3 1631 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 EEF1B2P24534 225 aaKnown RBP11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 LAMB3Q13751 1172 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 C1orf54Q8WWF1 131 aa11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 MTG1Q9BT17 334 aaPredicted RBP11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 PACSIN2Q9UNF0 486 aaPredicted RBP11.12□□□□□ -0.63
CACNA1S-201ENST00000362061 CCDC78A2IDD5 438 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 ALDH2P05091 517 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 KLRC1P26715 233 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 USP50Q70EL3 339 aaPredicted RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SOCS4Q8WXH5 440 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 FBXO32Q969P5 355 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 MCEEQ96PE7 176 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 TRIM55Q9BYV6 548 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 A0A0G2JND7 137 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 CCDC85CA6NKD9 419 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SYNCRIPO60506 623 aaKnown RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 FMO5P49326 533 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 TRPM5Q9NZQ8 1165 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 CTIFO43310 598 aaKnown RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SLC26A4O43511 780 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SLC1A1P43005 524 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 RPL10AP62906 217 aaKnown RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 DEFB115Q30KQ5 88 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SPATA16Q9BXB7 569 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 MFSD1Q9H3U5 465 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 KITP10721 976 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 ATXN3P54252 364 aaPredicted RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 FSCBQ5H9T9 825 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 PTRHD1Q6GMV3 140 aaKnown RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 MIB1Q86YT6 1006 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 IGFLR1Q9H665 355 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 TEKT2Q9UIF3 430 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 ACADMP11310 421 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 MYL4P12829 197 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 AKR1A1P14550 325 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 RPA1P27694 616 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 ARSEP51690 589 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 IFT88Q13099 833 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 POLD3Q15054 466 aaPredicted RBP11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SHC4Q6S5L8 630 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 HASPINQ8TF76 798 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 KIFC3Q9BVG8 833 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SLC13A1Q9BZW2 595 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 SELENONQ9NZV5 590 aa11.11□□□□□ -0.63
CACNA1S-201ENST00000362061 AP1G2O75843 785 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 AMHP03971 560 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 SLC2A3P11169 496 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ACO1P21399 889 aaKnown RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 HMOX2P30519 316 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ATP11CQ8NB49 1132 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 RPRD1AQ96P16 312 aaPredicted RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 CINPQ9BW66 212 aaPredicted RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ASPSCR1Q9BZE9 553 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 PTPRUQ92729 1446 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 THP07101 528 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 KLRC2P26717 231 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 PPP3CCP48454 512 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 BTBD6Q96KE9 485 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 FOXN1O15353 648 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 STRNO43815 780 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ZNF286BP0CG31 522 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 SYCP2LQ5T4T6 812 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 PDXDC1Q6P996 788 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 WDR48Q8TAF3 677 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 STK33Q9BYT3 514 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 A0A087WUV0 522 aaPredicted RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ASS1P00966 412 aaKnown RBP11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ZSCAN26Q16670 478 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 ZNF280DQ6N043 979 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
CACNA1S-201ENST00000362061 OTUB1Q96FW1 271 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms