RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 FOCADQ5VW36 1801 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 DNAJC25-GNG10A0A024R161 153 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 SLC15A5A6NIM6 579 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 MSCO60682 206 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 CFHP08603 1231 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 ADORA2BP29275 332 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 THPOP40225 353 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 CDR2Q01850 454 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 RHOT2Q8IXI1 618 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 ANKRD7Q92527 254 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 MFSD14AQ96MC6 490 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 PLVAPQ9BX97 442 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 MCM3P25205 808 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 CPT1AP50416 773 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 FCGRTP55899 365 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 SNRPFP62306 86 aaKnown RBP12.4□□□□□ -0.43
HPS1-204ENST00000361490 ZPBP2Q6X784 338 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 HASPINQ8TF76 798 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.43
HPS1-204ENST00000361490 NIF3L1Q9GZT8 377 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.43
HPS1-204ENST00000361490 C22orf31O95567 290 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 CLTAP09496 248 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 MARCKSL1P49006 195 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 MYO1EQ12965 1108 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 PAPD7Q5XG87 772 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 IFT20Q8IY31 132 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 KRT35Q92764 455 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 MED10Q9BTT4 135 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 GOLGA2P5Q9HBQ8 144 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 FLRT1Q9NZU1 646 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 TIMM13Q9Y5L4 95 aaPredicted RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 KIAA0100Q14667 2235 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 C17orf102A2RUQ5 167 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 IQCF3P0C7M6 154 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 TBXAS1P24557 533 aaPredicted RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 PSEN2P49810 448 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 SF3A3Q12874 501 aaKnown RBP eCLIP12.39□□□□□ -0.435e-6■■■■□ 19.6
HPS1-204ENST00000361490 TRIM32Q13049 653 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 SMTNL2Q2TAL5 461 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 RIN2Q8WYP3 895 aaPredicted RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 ST6GALNAC4Q9H4F1 302 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 A8MXQ7 604 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 GAS2O43903 313 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 RFX1P22670 979 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 OAS2P29728 719 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 CA8P35219 290 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 ATP11AP98196 1134 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 MTM1Q13496 603 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 SURF1Q15526 300 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 ASTE1Q2TB18 679 aaPredicted RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 FOXR2Q6PJQ5 311 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 APBB1IPQ7Z5R6 666 aaPredicted RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 EMC1Q8N766 993 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 TMEM35BQ8NCS4 154 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 MCEEQ96PE7 176 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 NXF3Q9H4D5 531 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 HESX1Q9UBX0 185 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
HPS1-204ENST00000361490 UTP11Q9Y3A2 253 aaKnown RBP12.39□□□□□ -0.43
HPS1-204ENST00000361490 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 PRKCIP41743 596 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 LMAN1P49257 510 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 PLTPP55058 493 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 RTP1P59025 263 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 FMO1Q01740 532 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 PRKCZQ05513 592 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 TARBP2Q15633 366 aaKnown RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 FAM182AQ5T1J6 154 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 SHC3Q92529 594 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 BEGAINQ9BUH8 593 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 SMYD3Q9H7B4 428 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 ANKZF1Q9H8Y5 726 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 NGRNQ9NPE2 291 aaKnown RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 DPP3Q9NY33 737 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 CCDC151A5D8V7 595 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 SART1O43290 800 aaKnown RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 GHRP10912 638 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 FECHP22830 423 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 JAM2P57087 298 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 BRD3Q15059 726 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms