RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 VSTM4Q8IW00 320 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 DRC7Q8IY82 874 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 HPDLQ96IR7 371 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 UROC1Q96N76 676 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
LMNA-202ENST00000361308 UBE2OQ9C0C9 1292 aaKnown RBP18.27■□□□□ 0.52
LMNA-202ENST00000361308 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.52
LMNA-202ENST00000361308 TRIM21P19474 475 aaKnown RBP18.26■□□□□ 0.51
LMNA-202ENST00000361308 DSC1Q08554 894 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 BTG3Q14201 252 aaPredicted RBP18.26■□□□□ 0.51
LMNA-202ENST00000361308 SHHQ15465 462 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 UPP1Q16831 310 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 ZNF699Q32M78 642 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 C9orf50Q5SZB4 431 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 RASIP1Q5U651 963 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 COLGALT2Q8IYK4 626 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 LRRC52Q8N7C0 313 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 NEK11Q8NG66 645 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 TAF4BQ92750 862 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
LMNA-202ENST00000361308 NUP58Q9BVL2 599 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 NRDE2Q9H7Z3 1164 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 PLCB1Q9NQ66 1216 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 CACNG4Q9UBN1 327 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.26■□□□□ 0.517e-11■□□□□ 10.6
LMNA-202ENST00000361308 ITIH6Q6UXX5 1313 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 PODXLO00592 558 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 ASS1P00966 412 aaKnown RBP18.26■□□□□ 0.51
LMNA-202ENST00000361308 ALDH2P05091 517 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 PNPLA4P41247 253 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 WDR72Q3MJ13 1102 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 CMTR2Q8IYT2 770 aaKnown RBP18.26■□□□□ 0.51
LMNA-202ENST00000361308 ZNF560Q96MR9 790 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 NT5C1BQ96P26 610 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 GDF15Q99988 308 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 XYLT2Q9H1B5 865 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 INSL6Q9Y581 213 aa18.26■□□□□ 0.51
LMNA-202ENST00000361308 PPEF2O14830 753 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 B3GAT3O94766 335 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 CDC25BP30305 580 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 OR1G1P47890 313 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 NOP14P78316 857 aaKnown RBP18.25■□□□□ 0.51
LMNA-202ENST00000361308 APBA1Q02410 837 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 KLHDC7AQ5VTJ3 777 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 PHLDB3Q6NSJ2 640 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 DCLRE1AQ6PJP8 1040 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 TMC6Q7Z403 805 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.25■□□□□ 0.51
LMNA-202ENST00000361308 RABGGTAQ92696 567 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 ELMO3Q96BJ8 720 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 PAAF1Q9BRP4 392 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 RC3H2Q9HBD1 1191 aaKnown RBP18.25■□□□□ 0.51
LMNA-202ENST00000361308 APEX2Q9UBZ4 518 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 DNAJB4Q9UDY4 337 aa18.25■□□□□ 0.51
LMNA-202ENST00000361308 STAU1O95793 577 aaKnown RBP18.24■□□□□ 0.51
LMNA-202ENST00000361308 TAF6P49848 677 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
LMNA-202ENST00000361308 ZNF667Q5HYK9 610 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 SPOPLQ6IQ16 392 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 PPM1KQ8N3J5 372 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 TATDN2Q93075 761 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 RAD9AQ99638 391 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 VRTNQ9H8Y1 702 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 SIX2Q9NPC8 291 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 UBE2TQ9NPD8 197 aaPredicted RBP18.24■□□□□ 0.51
LMNA-202ENST00000361308 NXF1Q9UBU9 619 aaKnown RBP18.24■□□□□ 0.51
LMNA-202ENST00000361308 NUB1Q9Y5A7 615 aa18.24■□□□□ 0.51
LMNA-202ENST00000361308 PDCD11Q14690 1871 aaKnown RBP18.24■□□□□ 0.51
LMNA-202ENST00000361308 TDRD15B5MCY1 1934 aaKnown RBP18.24■□□□□ 0.51
LMNA-202ENST00000361308 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 TLL1O43897 1013 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 B4GALT3O60512 393 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 UCHL3P15374 230 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 ALDH7A1P49419 539 aaKnown RBP18.23■□□□□ 0.51
LMNA-202ENST00000361308 LILRA4P59901 499 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 SPOUT1Q5T280 376 aaKnown RBP18.23■□□□□ 0.51
LMNA-202ENST00000361308 DPY19L2P1Q6NXN4 242 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 RRAGAQ7L523 313 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 TMEM175Q9BSA9 504 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 APOBEC3GQ9HC16 384 aaKnown RBP18.23■□□□□ 0.51
LMNA-202ENST00000361308 FAN1Q9Y2M0 1017 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 NRP1O14786 923 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 NOL4O94818 638 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 P4HA1P13674 534 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 POLR2FP61218 127 aaKnown RBP18.23■□□□□ 0.51
LMNA-202ENST00000361308 SV2CQ496J9 727 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 FIGNQ5HY92 759 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 GJB7Q6PEY0 223 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 CACNA2D4Q7Z3S7 1137 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 PPFIBP1Q86W92 1011 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 CPLX3Q8WVH0 158 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 IQCDQ96DY2 449 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 FAM81BQ96LP2 452 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 COLEC11Q9BWP8 271 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 CWH43Q9H720 699 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 HCSTQ9UBK5 93 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 FBXL5Q9UKA1 691 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 DNAJC12Q9UKB3 198 aa18.23■□□□□ 0.51
LMNA-202ENST00000361308 PRG3Q9Y2Y8 225 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms