RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 NNTQ13423 1086 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 RAPGEF1Q13905 1077 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 TUBB8Q3ZCM7 444 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 RSPH3Q86UC2 560 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 THNSL1Q8IYQ7 743 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 ELMO3Q96BJ8 720 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 RUFY1Q96T51 708 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 ADPGKQ9BRR6 497 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 TLR10Q9BXR5 811 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 RASSF4Q9H2L5 321 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 FEZ2Q9UHY8 353 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 GRID2IPA4D2P6 1211 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 M0QZ92 97 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 AGPSO00116 658 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 HSF2BPO75031 334 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 CABYRO75952 493 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 CLSTN1O94985 981 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 RPLP2P05387 115 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 MCF2P10911 925 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 DARSP14868 501 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 OSTNP61366 133 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 ITGA7Q13683 1181 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 SNX17Q15036 470 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 NAB2Q15742 525 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 KYAT1Q16773 422 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 C10orf76Q5T2E6 689 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 SERINC5Q86VE9 423 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 SESTD1Q86VW0 696 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 BRSK2Q8IWQ3 736 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 GSPT2Q8IYD1 628 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 FBXL13Q8NEE6 735 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 CAVIN3Q969G5 261 aa14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 DMGDHQ9UI17 866 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 CPSF3Q9UKF6 684 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-201ENST00000360718 EIF4BP23588 611 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 CXCR5P32302 372 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 AP3M2P53677 418 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 CLDN10P78369 228 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 ASIC2Q16515 512 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 SLC18A3Q16572 532 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 SV2AQ7L0J3 742 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 SEMA4DQ92854 862 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 OSBPL7Q9BZF2 842 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.154e-7■■■■□ 22.8
SQSTM1-201ENST00000360718 TRMT13Q9NUP7 481 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 AIPL1Q9NZN9 384 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 MKI67P46013 3256 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 A0A1B0GUA9 196 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 BUB1O43683 1085 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 KLHL30Q0D2K2 578 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 BIRC3Q13489 604 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 CGRRF1Q99675 332 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 RPF1Q9H9Y2 349 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 DNAJC12Q9UKB3 198 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 COQ4Q9Y3A0 265 aa14.11□□□□□ -0.15
SQSTM1-201ENST00000360718 A0A1W2PQ45 241 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 A0A1W2PQY0 241 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 NCK2O43639 380 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 STAT1P42224 750 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CRYBB1P53674 252 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 ENOX2Q16206 610 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 PTGISQ16647 500 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 IFI16Q16666 785 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 C15orf39Q6ZRI6 1047 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 TMEM130Q8N3G9 435 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 OR5B17Q8NGF7 314 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 TAS1R2Q8TE23 839 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 HDAC7Q8WUI4 952 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 RIN2Q8WYP3 895 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 PSMB7Q99436 277 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 STK33Q9BYT3 514 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 PAK6Q9NQU5 681 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 RSPH14Q9UHP6 348 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 SALL4Q9UJQ4 1053 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 BZW2Q9Y6E2 419 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 SHOX2O60902 331 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 IL18RAPO95256 599 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CHRNA1P02708 482 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CLTAP09496 248 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CTSHP09668 335 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CCDC172P0C7W6 258 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 SLC7A5Q01650 507 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 ARID5AQ03989 594 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 PHLDB3Q6NSJ2 640 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 WDR49Q8IV35 697 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 NT5C1BQ96P26 610 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 TSEN34Q9BSV6 310 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CELF4Q9BZC1 486 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 FAM107BQ9H098 131 aa14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 UBE2TQ9NPD8 197 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-201ENST00000360718 CDY2AQ9Y6F7 541 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms