RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 EMILIN2Q9BXX0 1053 aa20.7■□□□□ 0.9
HLA-DRB1-201ENST00000360004 IGFLR1Q9H665 355 aa20.7■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ITGA11Q9UKX5 1188 aa20.7■□□□□ 0.9
HLA-DRB1-201ENST00000360004 AGAP1Q9UPQ3 857 aa20.7■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PCDHGC5Q9Y5F6 944 aa20.7■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TRIP11Q15643 1979 aa20.7■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PLXNA4Q9HCM2 1894 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ARHGEF37A1IGU5 675 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 MAPK13O15264 365 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 AKAP3O75969 853 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 POLR2BP30876 1174 aaKnown RBP20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PNPLA4P41247 253 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TAF6P49848 677 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 VAMP7P51809 220 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 AP3M2P53677 418 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PMS1P54277 932 aaKnown RBP20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 RBP5P82980 135 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TRPC3Q13507 836 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SV2CQ496J9 727 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TCEAL5Q5H9L2 206 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 C3orf58Q8NDZ4 430 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TMEM174Q8WUU8 243 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 B3GALT6Q96L58 329 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 POP1Q99575 1024 aaKnown RBP20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TTPALQ9BTX7 342 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 MKNK1Q9BUB5 465 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 VN1R3Q9BXE9 311 aa20.69■□□□□ 0.9
HLA-DRB1-201ENST00000360004 FSCN2O14926 492 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SLC16A3O15427 465 aaKnown RBP20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PAX3P23760 479 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 NRIP1P48552 1158 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 CREMQ03060 361 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 BFSP1Q12934 665 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 MYO1EQ12965 1108 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 CAMK1Q14012 370 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 KLHL40Q2TBA0 621 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SKOR2Q2VWA4 1001 aaPredicted RBP20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TCERG1LQ5VWI1 586 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PDXDC1Q6P996 788 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TAS1R1Q7RTX1 841 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 CREBRFQ8IUR6 639 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TMEM130Q8N3G9 435 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 OR5B17Q8NGF7 314 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TMC2Q8TDI7 906 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 CEP63Q96MT8 703 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 MMRN2Q9H8L6 949 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 RWDD2AQ9UIY3 292 aa20.68■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SPDYE4A6NLX3 237 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 LRRIQ3A6PVS8 624 aaPredicted RBP20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PPEF2O14830 753 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 STX10O60499 249 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SRGAP2BP0DMP2 458 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PTPN14Q15678 1187 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 STX1AQ16623 288 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 DPCR1Q3MIW9 517 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 DCAF17Q5H9S7 520 aaPredicted RBP20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 MRPL43Q8N983 215 aaKnown RBP20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 C1orf127Q8N9H9 656 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 APPL2Q8NEU8 664 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PARD3BQ8TEW8 1205 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 FAM84AQ96KN4 292 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ANO10Q9NW15 660 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TMEM63CQ9P1W3 806 aa20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ARMCX3Q9UH62 379 aaPredicted RBP20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PDCD11Q14690 1871 aaKnown RBP20.67■□□□□ 0.9
HLA-DRB1-201ENST00000360004 CHD7Q9P2D1 2997 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 FSD2A1L4K1 749 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 C2orf71A6NGG8 1288 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 HIDE1A8MVS5 230 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PER2O15055 1255 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ODC1P11926 461 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 KLRC2P26717 231 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TKTP29401 623 aaKnown RBP20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 DSG1Q02413 1049 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PSMD5Q16401 504 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TTI2Q6NXR4 508 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TRAPPC11Q7Z392 1133 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ADGRD2Q7Z7M1 963 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 METTL23Q86XA0 190 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SUSD3Q96L08 255 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 METTL14Q9HCE5 456 aaKnown RBP20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PTPRJQ12913 1337 aa20.66■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ANO9A1A5B4 782 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PIRO00625 290 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 SYN3O14994 580 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 NCK2O43639 380 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 LETM1O95202 739 aaPredicted RBP20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ADH1AP07327 375 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TRIM49P0CI25 452 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 TRIM49CP0CI26 452 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 LILRA4P59901 499 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 RTP2Q5QGT7 225 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 PRSS55Q6UWB4 352 aaPredicted RBP20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 RBM43Q6ZSC3 357 aaKnown RBP20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 ANKS3Q6ZW76 656 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 FILIP1Q7Z7B0 1213 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 GLYCTKQ8IVS8 523 aa20.65■□□□□ 0.9
HLA-DRB1-201ENST00000360004 LRRC52Q8N7C0 313 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms