RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 RBM5P52756 815 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPE-202ENST00000359429 IRX1P78414 480 aaPredicted RBP11.56□□□□□ -0.56
RPE-202ENST00000359429 SPP2Q13103 211 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 SETDB1Q15047 1291 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 P3H1Q32P28 736 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 KRT39Q6A163 491 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 ZNF365Q70YC5 407 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 TMEM174Q8WUU8 243 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 C10orf82Q8WW14 230 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 MOV10L1Q9BXT6 1211 aaKnown RBP11.56□□□□□ -0.56
RPE-202ENST00000359429 FHDC1Q9C0D6 1143 aaPredicted RBP11.56□□□□□ -0.56
RPE-202ENST00000359429 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 USH1CQ9Y6N9 552 aa11.56□□□□□ -0.56
RPE-202ENST00000359429 RBBP6Q7Z6E9 1792 aaKnown RBP11.56□□□□□ -0.56
RPE-202ENST00000359429 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 A0A1W2PPM1 405 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 LIN7AO14910 233 aaPredicted RBP11.55□□□□□ -0.56
RPE-202ENST00000359429 PMM2O15305 246 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 EDF1O60869 148 aaKnown RBP11.55□□□□□ -0.56
RPE-202ENST00000359429 CFHP08603 1231 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 GJC1P36383 396 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 PEX3P56589 373 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 GTF2BQ00403 316 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 PCNX4Q63HM2 1172 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 RELL1Q8IUW5 271 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 POMGNT1Q8WZA1 660 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 NUDCD1Q96RS6 583 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 TRABDQ9H4I3 376 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 DENND2DQ9H6A0 471 aaPredicted RBP11.55□□□□□ -0.56
RPE-202ENST00000359429 SAYSD1Q9NPB0 183 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 COQ4Q9Y3A0 265 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 LTBP1Q14766 1721 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 UMODL1Q5DID0 1318 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 MYPNQ86TC9 1320 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 MYH11P35749 1972 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 BTAF1O14981 1849 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 MAPK13O15264 365 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 PIAS1O75925 651 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 MYBL1P10243 752 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 CD58P19256 250 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 SSTR3P32745 418 aaPredicted RBP11.55□□□□□ -0.56
RPE-202ENST00000359429 MAN1A1P33908 653 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 GPC3P51654 580 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 STAT2P52630 851 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 CCNG2Q16589 344 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 ATP13A4Q4VNC1 1196 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 AGGF1Q8N302 714 aaeCLIP11.55□□□□□ -0.56
RPE-202ENST00000359429 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
RPE-202ENST00000359429 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 CCDC77Q9BR77 488 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 KLHL11Q9NVR0 708 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 RAB20Q9NX57 234 aa11.55□□□□□ -0.56
RPE-202ENST00000359429 PDHA1P08559 390 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 ATP4AP20648 1035 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 HSPA1LP34931 641 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 PTDSS1P48651 473 aaKnown RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 INHBEP58166 350 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 CENPCQ03188 943 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 PDK4Q16654 411 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 TAF1BQ53T94 588 aaPredicted RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 ZCCHC9Q8N567 271 aaKnown RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 NT5C1BQ96P26 610 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 LBHD1Q9BQE6 289 aaPredicted RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 OSBPL8Q9BZF1 889 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 QSER1Q2KHR3 1735 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 SPDYE5A6NIY4 337 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 PRPF4O43172 522 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPE-202ENST00000359429 BANF1O75531 89 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 KRT10P13645 584 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 TCF4P15884 667 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 SPARCL1Q14515 664 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 THEMIS2Q5TEJ8 643 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 RFWD3Q6PCD5 774 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 SV2AQ7L0J3 742 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 OTOAQ7RTW8 1153 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 FBXL13Q8NEE6 735 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 IL31RAQ8NI17 732 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 MAIP1Q8WWC4 291 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 INPP5DQ92835 1189 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 MIPEPQ99797 713 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 C12orf65Q9H3J6 166 aaKnown RBP11.54□□□□□ -0.56
RPE-202ENST00000359429 TMEM8AQ9HCN3 771 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 CYLDQ9NQC7 956 aa11.54□□□□□ -0.56
RPE-202ENST00000359429 PI4K2BG5E9Z4 385 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 ATP5HO75947 161 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 LUC7L3O95232 432 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms