RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 MARSP56192 900 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 IRX4P78413 519 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 ZC3H18Q86VM9 953 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 NME8Q8N427 588 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 RAB3IL1Q8TBN0 382 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 RAB3IPQ96QF0 476 aaPredicted RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 CYP26B1Q9NR63 512 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 MYH13Q9UKX3 1938 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 ANKRD63C9JTQ0 380 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 AGPSO00116 658 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 DIAPH2O60879 1101 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 LCA5LO95447 670 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 KRT10P13645 584 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 GTF2H1P32780 548 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 GMPSP49915 693 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 CRYMQ14894 314 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 TRMT10CQ7L0Y3 403 aaKnown RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 LRRC34Q8IZ02 419 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 TTC17Q96AE7 1141 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 DCTN4Q9UJW0 460 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 MAGED2Q9UNF1 606 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 hCG_2014768A0A024R1R8 64 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 A6NJR5 290 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 RPL21P46778 160 aaKnown RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 ARL4CP56559 192 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 PCNX4Q63HM2 1172 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 ALG13Q9NP73 1137 aaKnown RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 AKAP11Q9UKA4 1901 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 A0A0G2JND7 137 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 M0QYV0 167 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 WNT10BO00744 389 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 ERFP50548 548 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 RCN2Q14257 317 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 PGM5Q15124 567 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 SURF1Q15526 300 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 SMAD1Q15797 465 aaKnown RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-201ENST00000358894 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 HOMEZQ8IX15 550 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 PARD3BQ8TEW8 1205 aa12.97□□□□□ -0.33
COL20A1-201ENST00000358894 EXTL3O43909 919 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 CDH16O75309 829 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 ZBED1O96006 694 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 ALG3Q92685 438 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 CDC42EP4Q9H3Q1 356 aaKnown RBP12.96□□□□□ -0.33
COL20A1-201ENST00000358894 PXMP2Q9NR77 195 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 G3BP2Q9UN86 482 aaKnown RBP12.96□□□□□ -0.33
COL20A1-201ENST00000358894 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 PRKCBP05771 671 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 RARAP10276 462 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 KRT3P12035 628 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 FAM102AQ5T9C2 384 aaPredicted RBP12.96□□□□□ -0.33
COL20A1-201ENST00000358894 CYP4A22Q5TCH4 519 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 C1orf131Q8NDD1 294 aaKnown RBP12.96□□□□□ -0.33
COL20A1-201ENST00000358894 MIS12Q9H081 205 aa12.96□□□□□ -0.33
COL20A1-201ENST00000358894 RANBP17Q9H2T7 1088 aaKnown RBP12.96□□□□□ -0.33
COL20A1-201ENST00000358894 F5H423 210 aaPredicted RBP12.96□□□□□ -0.34
COL20A1-201ENST00000358894 CAPN9O14815 690 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 CIB2O75838 187 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 FLT3P36888 993 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 FNTAP49354 379 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 IFI35P80217 286 aaPredicted RBP12.96□□□□□ -0.34
COL20A1-201ENST00000358894 CYP24A1Q07973 514 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 Q3C1V9 767 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 CCDC14Q49A88 953 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 IQCKQ8N0W5 287 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 FAF2Q96CS3 445 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 NEU2Q9Y3R4 380 aa12.96□□□□□ -0.34
COL20A1-201ENST00000358894 CES2O00748 559 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 ATP9AO75110 1047 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 CPP00450 1065 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 ADRB2P07550 413 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 FOXR2Q6PJQ5 311 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SLC30A9Q6PML9 568 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 RNF169Q8NCN4 708 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 CCNYQ8ND76 341 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 DDX23Q9BUQ8 820 aaKnown RBP12.95□□□□□ -0.34
COL20A1-201ENST00000358894 ETNK1Q9HBU6 452 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 MYBPC2Q14324 1141 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 BMT2Q1RMZ1 405 aa12.95□□□□□ -0.34
COL20A1-201ENST00000358894 GPAT2Q6NUI2 795 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms