RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 C9orf57Q5W0N0 161 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 KCNT2Q6UVM3 1135 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 COLGALT1Q8NBJ5 622 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 CLP1Q92989 425 aaKnown RBP16.44■□□□□ 0.22
TPM1-206ENST00000358278 ZNF560Q96MR9 790 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 VPS16Q9H269 839 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 LIMA1Q9UHB6 759 aaKnown RBP16.44■□□□□ 0.22
TPM1-206ENST00000358278 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 FAN1Q9Y2M0 1017 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 PCDHB12Q9Y5F1 795 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 TSC2P49815 1807 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 NRP1O14786 923 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 B3GAT3O94766 335 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 SERPINC1P01008 464 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 GALTP07902 379 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 DNAJB2P25686 324 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 CTNNB1P35222 781 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 RBP5P82980 135 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 SMAD3P84022 425 aaKnown RBP16.43■□□□□ 0.22
TPM1-206ENST00000358278 VWA3BQ502W6 1294 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 HASPINQ8TF76 798 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 NDST4Q9H3R1 872 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 SIX4Q9UIU6 781 aa16.43■□□□□ 0.22
TPM1-206ENST00000358278 ANO9A1A5B4 782 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 PPEF2O14830 753 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 KIF4AO95239 1232 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 PPM1AP35813 382 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 COPB1P53618 953 aaKnown RBP16.42■□□□□ 0.22
TPM1-206ENST00000358278 NCOA4Q13772 614 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 MIIPQ5JXC2 388 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 PPP2R2DQ66LE6 453 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 C15orf39Q6ZRI6 1047 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 FBXL13Q8NEE6 735 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 COLEC11Q9BWP8 271 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 IMPG2Q9BZV3 1241 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 SLC28A3Q9HAS3 691 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 NUB1Q9Y5A7 615 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
TPM1-206ENST00000358278 PIRO00625 290 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 PNPLA4P41247 253 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 MYO1EQ12965 1108 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 DCLRE1AQ6PJP8 1040 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 LRRC52Q8N7C0 313 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 CCDC150Q8NCX0 1101 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 C3orf58Q8NDZ4 430 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
TPM1-206ENST00000358278 F8W810 466 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 P4HA2O15460 535 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 TADA2AO75478 443 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 ARHGEF15O94989 841 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 VNN1O95497 513 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 LINC00271P0C7V0 271 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 TAF6P49848 677 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 TAP1Q03518 808 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 SV2CQ496J9 727 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 FKBP15Q5T1M5 1219 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 CXorf38Q8TB03 319 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 TIFAQ96CG3 184 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 TGS1Q96RS0 853 aaKnown RBP16.41■□□□□ 0.22
TPM1-206ENST00000358278 C17orf80Q9BSJ5 609 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 MARCH5Q9NX47 278 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 SPG21Q9NZD8 308 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 GCNT4Q9P109 453 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 ADAM28Q9UKQ2 775 aa16.41■□□□□ 0.22
TPM1-206ENST00000358278 LGALS16A8MUM7 142 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 CST3P01034 146 aaPredicted RBP16.4■□□□□ 0.22
TPM1-206ENST00000358278 ITGB1P05556 798 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 MYL6P60660 151 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 FANCCQ00597 558 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 PLCB2Q00722 1185 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
TPM1-206ENST00000358278 IGSF21Q96ID5 467 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 SAMD11Q96NU1 681 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPM1-206ENST00000358278 RAB20Q9NX57 234 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 ATG2AQ2TAZ0 1938 aa16.4■□□□□ 0.22
TPM1-206ENST00000358278 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.219e-6■■■■■ 68.9
TPM1-206ENST00000358278 LRRC10BA6NIK2 292 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 PMM2O15305 246 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 ATICP31939 592 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 BMPR1AP36894 532 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 LILRA4P59901 499 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 SGSM1Q2NKQ1 1148 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 GBP6Q6ZN66 633 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 APTXQ7Z2E3 356 aaKnown RBP16.39■□□□□ 0.21
TPM1-206ENST00000358278 SLC39A11Q8N1S5 342 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms