RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 MMS22LQ6ZRQ5 1243 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
PHTF1-201ENST00000357783 RUNDC3BQ96NL0 473 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 LRRC19Q9H756 370 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 O00370 1275 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 CAND2O75155 1236 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 GJB6O95452 261 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 FGFR4P22455 802 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 TBXAS1P24557 533 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-201ENST00000357783 TMOD1P28289 359 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 GBP1P32455 592 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
PHTF1-201ENST00000357783 SEMA4AQ9H3S1 761 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 CHST7Q9NS84 486 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 SLC12A6Q9UHW9 1150 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 LRRC37A2A6NM11 1700 aa16.88■□□□□ 0.29
PHTF1-201ENST00000357783 SMIM23A6NLE4 172 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 NF2P35240 595 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 GJC1P36383 396 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 SLC1A1P43005 524 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 KRT17Q04695 432 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 TRIM72Q6ZMU5 477 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 BRSK2Q8IWQ3 736 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 MRPL4Q9BYD3 311 aaKnown RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 MTMR12Q9C0I1 747 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 FAM107BQ9H098 131 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 PPANQ9NQ55 473 aaKnown RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 FEZ2Q9UHY8 353 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 USTQ9Y2C2 406 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 DICER1Q9UPY3 1922 aaKnown RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 MCM3APO60318 1980 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 PROSCO94903 275 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 NUDT17P0C025 328 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 POTEJP0CG39 1038 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 SLC29A2Q14542 456 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 HOOK3Q86VS8 718 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 ZNF668Q96K58 619 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 IMPG2Q9BZV3 1241 aa16.87■□□□□ 0.29
PHTF1-201ENST00000357783 ASCC2Q9H1I8 757 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.87■□□□□ 0.29
PHTF1-201ENST00000357783 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 E7EVH7 732 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 MSCO60682 206 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 CST3P01034 146 aaPredicted RBP16.86■□□□□ 0.29
PHTF1-201ENST00000357783 SSR1P43307 286 aaKnown RBP16.86■□□□□ 0.29
PHTF1-201ENST00000357783 CORO7P57737 925 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 LAMTOR4Q0VGL1 99 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 MAMLD1Q13495 774 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 ZPBP2Q6X784 338 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 RNF149Q8NC42 400 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 ART4Q93070 314 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 HEMGNQ9BXL5 484 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
PHTF1-201ENST00000357783 CNMDO75829 334 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 TGFB3P10600 412 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 CD58P19256 250 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 NLRP14Q86W24 1093 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
PHTF1-201ENST00000357783 ASIC3Q9UHC3 531 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 FAM169AQ9Y6X4 670 aa16.86■□□□□ 0.29
PHTF1-201ENST00000357783 FAM189A1O60320 539 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 TOM1L1O75674 476 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 PRKCBP05771 671 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 EFNA5P52803 228 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 TAS2R40P59535 323 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 PDE4CQ08493 712 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 CALCOCO2Q13137 446 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 ZNF473Q8WTR7 871 aaKnown RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 FAM167AQ96KS9 214 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 CCT8L2Q96SF2 557 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 CNTN6Q9UQ52 1028 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 R3HDM2Q9Y2K5 976 aaKnown RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 PAPPA2Q9BXP8 1791 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 A0A0G2JLL6 359 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 RALAP11233 206 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 MYL6P60660 151 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 IER5Q5VY09 327 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 PRRT2Q7Z6L0 340 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 PHF13Q86YI8 300 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 MYCBPAPQ8TBZ2 947 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 TRAPPC12Q8WVT3 735 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 ZNF606Q8WXB4 792 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 GPR20Q99678 358 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 FAM118BQ9BPY3 351 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 MRPL47Q9HD33 250 aaKnown RBP16.85■□□□□ 0.29
PHTF1-201ENST00000357783 TXNRD2Q9NNW7 524 aa16.85■□□□□ 0.29
PHTF1-201ENST00000357783 TLR3O15455 904 aaKnown RBP16.84■□□□□ 0.29
PHTF1-201ENST00000357783 ASS1P00966 412 aaKnown RBP16.84■□□□□ 0.29
PHTF1-201ENST00000357783 PTP4A2Q12974 167 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms