RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 EAPPQ56P03 285 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 FAM91A1Q658Y4 838 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 C4orf50Q6ZRC1 276 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 TRIM4Q9C037 500 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 DENND2DQ9H6A0 471 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 LARSQ9P2J5 1176 aaKnown RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 FETUBQ9UGM5 382 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ASIC3Q9UHC3 531 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ANAPC5Q9UJX4 755 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 NEU2Q9Y3R4 380 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 SPOPO43791 374 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ZBED4O75132 1171 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 CHKAP35790 457 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ITGA8P53708 1063 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 PABPC4Q13310 644 aaKnown RBP eCLIP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 ATL2Q8NHH9 583 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 GORASP1Q9BQQ3 440 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 TUFT1Q9NNX1 390 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 SAP30BPQ9UHR5 308 aaKnown RBP11.31□□□□□ -0.6
CAPN3-205ENST00000357568 HAO1Q9UJM8 370 aa11.31□□□□□ -0.6
CAPN3-205ENST00000357568 CNTNAP1P78357 1384 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 ATRNL1Q5VV63 1379 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 FOXN3O00409 490 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CCDC22O60826 627 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 FOSP01100 380 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 TARSP26639 723 aaKnown RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 PSMC4P43686 418 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 GABPAQ06546 454 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 BFSP1Q12934 665 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 MESDQ14696 234 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 KYNUQ16719 465 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CYP4X1Q8N118 509 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 ZNF564Q8TBZ8 553 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 NCSTNQ92542 709 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 FAM81BQ96LP2 452 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 ZNF212Q9UDV6 495 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 FAM198AQ9UFP1 575 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 TCRBV7S2A1N4TA0A589 114 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 A8MXQ7 604 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 RASA4BC9J798 803 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 CLIC2O15247 247 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 RASA4O43374 803 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 DNAJC6O75061 913 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 FAM13AO94988 1023 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 SLC1A1P43005 524 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 AP1B1Q10567 949 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 FYB2Q5VWT5 728 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 PHLDB3Q6NSJ2 640 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 SULF1Q8IWU6 871 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 C12orf56Q8IXR9 622 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 RUSC1Q9BVN2 902 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 DMAP1Q9NPF5 467 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 AGPAT3Q9NRZ7 376 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 SEPT11Q9NVA2 429 aaKnown RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 NOCTQ9UK39 431 aaKnown RBP11.3□□□□□ -0.6
CAPN3-205ENST00000357568 PTPN22Q9Y2R2 807 aa11.3□□□□□ -0.6
CAPN3-205ENST00000357568 RNF8O76064 485 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 TUBP50607 506 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 PSMC6P62333 389 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 CDR2Q01850 454 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 SLC34A1Q06495 639 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 ALCAMQ13740 583 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 ZCCHC9Q8N567 271 aaKnown RBP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 GATA6Q92908 595 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 GJA10Q969M2 543 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 AZIN2Q96A70 460 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 DNAJB4Q9UDY4 337 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 SLC24A2Q9UI40 661 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 ASTN2O75129 1339 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms