RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 SCG3Q8WXD2 468 aaKnown RBP13.26□□□□□ -0.29
BDNF-202ENST00000356660 DHX38Q92620 1227 aaKnown RBP13.26□□□□□ -0.29
BDNF-202ENST00000356660 OSBPL8Q9BZF1 889 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 INO80BQ9C086 356 aaPredicted RBP13.26□□□□□ -0.29
BDNF-202ENST00000356660 DRG2P55039 364 aaKnown RBP13.26□□□□□ -0.29
BDNF-202ENST00000356660 NR1H3Q13133 447 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 SMAD1Q15797 465 aaKnown RBP13.26□□□□□ -0.29
BDNF-202ENST00000356660 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 PPP1R18Q6NYC8 613 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 CBWD1Q9BRT8 395 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 TSSK1BQ9BXA7 367 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 SLC13A1Q9BZW2 595 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 NDE1Q9NXR1 346 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 CSADQ9Y600 493 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 C4AP0C0L4 1744 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 C4BP0C0L5 1744 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 MSH4O15457 936 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 BAG6P46379 1132 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 AP3B2Q13367 1082 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 RNF169Q8NCN4 708 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
BDNF-202ENST00000356660 LXNQ9BS40 222 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 WHRNQ9P202 907 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 ASTN1O14525 1302 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 KRT36O76013 467 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 DLG4P78352 724 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 KPNB1Q14974 876 aaKnown RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 TLDC1Q6P9B6 456 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 RGS9BPQ6ZS82 235 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 SLFN11Q7Z7L1 901 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 RHPN2Q8IUC4 686 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 CYP4X1Q8N118 509 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 RBBP8NLQ8NC74 664 aaPredicted RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 ARMCX1Q9P291 453 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 NXF1Q9UBU9 619 aaKnown RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 SLC4A7Q9Y6M7 1214 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 TLR3O15455 904 aaKnown RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 LPXNO60711 386 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 ST13P4Q8IZP2 240 aaPredicted RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 CENPKQ9BS16 269 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 MOV10L1Q9BXT6 1211 aaKnown RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 MAD1L1Q9Y6D9 718 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 TRPA1O75762 1119 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 PTPN4P29074 926 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 BRDTQ58F21 947 aaPredicted RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 SPDYCQ5MJ68 293 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 SLC25A41Q8N5S1 370 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 SMG5Q9UPR3 1016 aaKnown RBP13.25□□□□□ -0.29
BDNF-202ENST00000356660 STXBP5LQ9Y2K9 1186 aa13.25□□□□□ -0.29
BDNF-202ENST00000356660 EML1O00423 815 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 ZSCAN5DPP0CG00 497 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 RPA3P35244 121 aaPredicted RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 RASSF3Q86WH2 238 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 SLC26A7Q8TE54 656 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 ART4Q93070 314 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 RNF34Q969K3 372 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 SHCBP1LQ9BZQ2 653 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 UVRAGQ9P2Y5 699 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 TOM1L1O75674 476 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 PYGLP06737 847 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 TAC1P20366 129 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 TPP2P29144 1249 aaPredicted RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 NT5C2P49902 561 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 TMED1Q13445 227 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 PSMD6Q15008 389 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 RHOT1Q8IXI2 618 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 PDIK1LQ8N165 341 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.24□□□□□ -0.29
BDNF-202ENST00000356660 CFAP36Q96G28 342 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 NSL1Q96IY1 281 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 TSNARE1Q96NA8 513 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 HSPBP1Q9NZL4 362 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 DYTNA2CJ06 578 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 ATP6V1C1P21283 382 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 RRM1P23921 792 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 ALDH18A1P54886 795 aaKnown RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 MARSP56192 900 aaKnown RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 TFAMQ00059 246 aaKnown RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 DEUP1Q05D60 604 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 USP4Q13107 963 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms