RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MAPK13O15264 365 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 FDX1P10109 184 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 GZMAP12544 262 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MFAP3P55082 362 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 SNRNP35Q16560 246 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MUM1Q2TAK8 710 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ACAD10Q6JQN1 1059 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 TMEM154Q6P9G4 183 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 LVRNQ6Q4G3 990 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 PPP1R21Q6ZMI0 780 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 OTOAQ7RTW8 1153 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 TRABD2AQ86V40 505 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ZBED8Q8IZ13 594 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 RFWD2Q8NHY2 731 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 HELQQ8TDG4 1101 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 SHC3Q92529 594 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 CCDC77Q9BR77 488 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 WDR11Q9BZH6 1224 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 NYAP2Q9P242 653 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 LARSQ9P2J5 1176 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 SAE1Q9UBE0 346 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 DNPEPQ9ULA0 475 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ZNF148Q9UQR1 794 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 USH1CQ9Y6N9 552 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ADGRA3Q8IWK6 1321 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 GRIN3BO60391 1043 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 PECAM1P16284 738 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ADRA1DP25100 572 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ADSSP30520 456 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 CPA2P48052 419 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MAPK6Q16659 721 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 FAM102BQ5T8I3 360 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 HHATQ5VTY9 493 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 IL31RAQ8NI17 732 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 DDX1Q92499 740 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 C8orf37Q96NL8 207 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MIPEPQ99797 713 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MAK16Q9BXY0 300 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 LRMDAQ9H2I8 198 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 TDRD3Q9H7E2 651 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 FBXO6Q9NRD1 293 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 SEL1LQ9UBV2 794 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 NEU2Q9Y3R4 380 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 COL16A1Q07092 1604 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 A6NHS1 94 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 KRT36O76013 467 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 GNAT1P11488 350 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 GPS1Q13098 491 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 PPP2R5CQ13362 524 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MOGSQ13724 837 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 SPARCL1Q14515 664 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 CCDC6Q16204 474 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 EAPPQ56P03 285 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 RC3H1Q5TC82 1133 aaKnown RBP10.75□□□□□ -0.69
PTPRA-203ENST00000356147 NLRP9Q7RTR0 991 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 CCDC125Q86Z20 511 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 OSBPL8Q9BZF1 889 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 HOMER2Q9NSB8 354 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 ZFP69BQ9UJL9 534 aa10.75□□□□□ -0.69
PTPRA-203ENST00000356147 COL5A3P25940 1745 aaPredicted RBP10.74□□□□□ -0.69
PTPRA-203ENST00000356147 ZBED4O75132 1171 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 MTA2O94776 668 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 POLR2MP0CAP2 368 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 KRT4P19013 534 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 DYNLT1P63172 113 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 MDH1BQ5I0G3 518 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 NT5C1BQ96P26 610 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 ACCSQ96QU6 501 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 SMC6Q96SB8 1091 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 PLVAPQ9BX97 442 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 UVRAGQ9P2Y5 699 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 PI4KBQ9UBF8 816 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 ZHX2Q9Y6X8 837 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 PPEF1O14829 653 aaPredicted RBP10.74□□□□□ -0.69
PTPRA-203ENST00000356147 SLC26A4O43511 780 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 EDF1O60869 148 aaKnown RBP10.74□□□□□ -0.69
PTPRA-203ENST00000356147 ITGB5P18084 799 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 SSTR1P30872 391 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 ARSEP51690 589 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 YARSP54577 528 aaKnown RBP10.74□□□□□ -0.69
PTPRA-203ENST00000356147 NFIL3Q16649 462 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 UGCGQ16739 394 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 SCARA3Q6AZY7 606 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 SV2AQ7L0J3 742 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 DNAJC9Q8WXX5 260 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 DDX50Q9BQ39 737 aaKnown RBP10.74□□□□□ -0.69
PTPRA-203ENST00000356147 TEKT3Q9BXF9 490 aa10.74□□□□□ -0.69
PTPRA-203ENST00000356147 SCAF8Q9UPN6 1271 aaKnown RBP10.74□□□□□ -0.69
PTPRA-203ENST00000356147 DSG3P32926 999 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 NRLP54845 237 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 SP4Q02446 784 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 MKRN3Q13064 507 aaKnown RBP10.73□□□□□ -0.69
PTPRA-203ENST00000356147 SPP2Q13103 211 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 STAT4Q14765 748 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 RCN1Q15293 331 aa10.73□□□□□ -0.69
PTPRA-203ENST00000356147 CLEC16AQ2KHT3 1053 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms