RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 USP27XA6NNY8 438 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 PIGHQ14442 188 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-202ENST00000355480 PCSK7Q16549 785 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 ZC2HC1CQ53FD0 456 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-202ENST00000355480 PTPRN2Q92932 1015 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 ELMO2Q96JJ3 720 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 NUDT12Q9BQG2 462 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 STOML1Q9UBI4 398 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 PDS5AQ29RF7 1337 aaKnown RBP18.94■□□□□ 0.62
COL18A1-202ENST00000355480 TULP4Q9NRJ4 1543 aa18.94■□□□□ 0.62
COL18A1-202ENST00000355480 GALCP54803 685 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 ZBTB17Q13105 803 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 KIZQ2M2Z5 673 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 SYDE1Q6ZW31 735 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-202ENST00000355480 CHST13Q8NET6 341 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 SPATA4Q8NEY3 305 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 SLC7A14Q8TBB6 771 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 DEFB129Q9H1M3 183 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 CELF2O95319 508 aaKnown RBP18.93■□□□□ 0.62
COL18A1-202ENST00000355480 UCHL3P15374 230 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 KRT72Q14CN4 511 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 ADSSL1Q8N142 457 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 RFWD2Q8NHY2 731 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 OTULINQ96BN8 352 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 CDV3Q9UKY7 258 aaKnown RBP18.93■□□□□ 0.62
COL18A1-202ENST00000355480 MYMKA6NI61 221 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 MTF1Q14872 753 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 ARHGEF40Q8TER5 1519 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 DMTNQ08495 405 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 PRMT7Q9NVM4 692 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-202ENST00000355480 LAMC1P11047 1609 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 ANKRD65E5RJM6 399 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 HBP1O60381 514 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 HLA-DRAP01903 254 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 TWF1Q12792 350 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 PKN3Q6P5Z2 889 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 AGBL1Q96MI9 1066 aa18.93■□□□□ 0.62
COL18A1-202ENST00000355480 ZC3H7BQ9UGR2 993 aaKnown RBP18.93■□□□□ 0.62
COL18A1-202ENST00000355480 SAMD7Q7Z3H4 446 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ARHGEF26Q96DR7 871 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 TSPAN17Q96FV3 270 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ADAM33Q9BZ11 813 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 WWP1Q9H0M0 922 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 TRABDQ9H4I3 376 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ETNK1Q9HBU6 452 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 DPYDQ12882 1025 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 NLRP14Q86W24 1093 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ECT2Q9H8V3 914 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ZNF609O15014 1411 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ANGPT2O15123 496 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 MEFVO15553 781 aaPredicted RBP18.92■□□□□ 0.62
COL18A1-202ENST00000355480 CPT1AP50416 773 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 USP10Q14694 798 aaKnown RBP18.92■□□□□ 0.62
COL18A1-202ENST00000355480 SUPT3HO75486 399 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ACADSBP45954 432 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 XPO7Q9UIA9 1087 aaKnown RBP18.92■□□□□ 0.62
COL18A1-202ENST00000355480 PCDHB7Q9Y5E2 793 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 SLC26A4O43511 780 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 UGP2Q16851 508 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
COL18A1-202ENST00000355480 CHUKO15111 745 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 NPTXRO95502 500 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 TRADDQ15628 312 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 ANKRD13AQ8IZ07 590 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 EPC1Q9H2F5 836 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 MRFAP1Q9Y605 127 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 MAFGO15525 162 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 WEE2P0C1S8 567 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 DPEP1P16444 411 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 HSPA9P38646 679 aaKnown RBP18.91■□□□□ 0.62
COL18A1-202ENST00000355480 LAMB3Q13751 1172 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 SRPK1Q96SB4 655 aaKnown RBP18.91■□□□□ 0.62
COL18A1-202ENST00000355480 RIT2Q99578 217 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 CATSPERBQ9H7T0 1116 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 JMJD4Q9H9V9 463 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 SRGNP10124 158 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 IL10P22301 178 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 ALDH1A3P47895 512 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 DCAF6Q58WW2 860 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 STYK1Q6J9G0 422 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 SLC25A41Q8N5S1 370 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 PKP3Q9Y446 797 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 PHF2O75151 1096 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 NOTUMQ6P988 496 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 CATSPER3Q86XQ3 398 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 DPF2Q92785 391 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 MS4A14Q96JA4 679 aa18.91■□□□□ 0.62
COL18A1-202ENST00000355480 C5orf58C9J3I9 102 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 DAB2P98082 770 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 SREBF2Q12772 1141 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 GOLGA7BQ2TAP0 167 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 CEP70Q8NHQ1 597 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 UBA3Q8TBC4 463 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 KCNV2Q8TDN2 545 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 RBM15Q96T37 977 aaKnown RBP eCLIP18.9■□□□□ 0.624e-10■■■■□ 26.2
COL18A1-202ENST00000355480 IGSF9BQ9UPX0 1349 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 GLI2P10070 1586 aa18.9■□□□□ 0.62
COL18A1-202ENST00000355480 ALDH18A1P54886 795 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms