RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 TPCN2Q8NHX9 752 aa24.47■■□□□ 1.51
SCAMP3-202ENST00000355379 VRTNQ9H8Y1 702 aa24.47■■□□□ 1.51
SCAMP3-202ENST00000355379 ACP6Q9NPH0 428 aa24.47■■□□□ 1.51
SCAMP3-202ENST00000355379 SIX4Q9UIU6 781 aa24.47■■□□□ 1.51
SCAMP3-202ENST00000355379 HYOU1Q9Y4L1 999 aa24.47■■□□□ 1.51
SCAMP3-202ENST00000355379 YWHAEP62258 255 aaKnown RBP24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 MRPS6P82932 125 aaKnown RBP24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 MEI1Q5TIA1 1274 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 GDF6Q6KF10 455 aaPredicted RBP24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 SLFN11Q7Z7L1 901 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 RHOT2Q8IXI1 618 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 RBBP8NLQ8NC74 664 aaPredicted RBP24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 CXorf38Q8TB03 319 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 TMEM40Q8WWA1 233 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 TSC1Q92574 1164 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 TRIP11Q15643 1979 aa24.46■■□□□ 1.51
SCAMP3-202ENST00000355379 STAU1O95793 577 aaKnown RBP24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 ASGR1P07306 291 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 GPC5P78333 572 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 CKAP4Q07065 602 aaKnown RBP24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 ARHGEF6Q15052 776 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 KCNA10Q16322 511 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 CLEC16AQ2KHT3 1053 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 ACAD10Q6JQN1 1059 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 TRIM72Q6ZMU5 477 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 RSRC2Q7L4I2 434 aaKnown RBP24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 SYCE1Q8N0S2 351 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 LRRC57Q8N9N7 239 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 RAET1EQ8TD07 263 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 UBXN4Q92575 508 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 TLR10Q9BXR5 811 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 THAP2Q9H0W7 228 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 DDX20Q9UHI6 824 aaKnown RBP24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 ITGA11Q9UKX5 1188 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 TRPV2Q9Y5S1 764 aa24.45■■□□□ 1.51
SCAMP3-202ENST00000355379 M0QZ92 97 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 CLSTN1O94985 981 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 TMEM270Q6UE05 265 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 SERINC5Q86VE9 423 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 SLC35G2Q8TBE7 412 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 ANKRD7Q92527 254 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 GOLGA1Q92805 767 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 SNX27Q96L92 541 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 TSPAN18Q96SJ8 248 aa24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 EIF2AQ9BY44 585 aaKnown RBP24.45■■□□□ 1.5
SCAMP3-202ENST00000355379 ITGB3P05106 788 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 ABCB4P21439 1286 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 YARSP54577 528 aaKnown RBP24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 PRMT2P55345 433 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 NAA30Q147X3 362 aaPredicted RBP24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 ZNF667Q5HYK9 610 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 PPP1R2P3Q6NXS1 205 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 ZNF784Q8NCA9 323 aaPredicted RBP24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 ARHGEF26Q96DR7 871 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 OSBPL9Q96SU4 736 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 BCO2Q9BYV7 579 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 SNTG2Q9NY99 539 aa24.44■■□□□ 1.5
SCAMP3-202ENST00000355379 CABYRO75952 493 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 MTA2O94776 668 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 KRT19P08727 400 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 UNGP13051 313 aaPredicted RBP24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 GNA15P30679 374 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 ASPAP45381 313 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 RNF180Q86T96 592 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 RPGRIP1Q96KN7 1286 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 FAM124BQ9H5Z6 455 aaPredicted RBP24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 CISHQ9NSE2 258 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 DPP3Q9NY33 737 aa24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 PIN4Q9Y237 131 aaKnown RBP24.43■■□□□ 1.5
SCAMP3-202ENST00000355379 CTAGE15A4D2H0 777 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 FKTNO75072 461 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 CYP1A1P04798 512 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 CTAGE8P0CG41 777 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 RBP5P82980 135 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 PTPN11Q06124 597 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 ERCC6LQ2NKX8 1250 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 FAM47CQ5HY64 1035 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 UBXN11Q5T124 520 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 ALKAL1Q6UXT8 129 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 CTAGE6Q86UF2 777 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 CTAGE4Q8IX94 777 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 UBE2Q2Q8WVN8 375 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 KIF12Q96FN5 646 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 TRIM6Q9C030 488 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 SAGE1Q9NXZ1 904 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 PUF60Q9UHX1 559 aaKnown RBP24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 CDY2AQ9Y6F7 541 aa24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 V9GYY5 206 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-202ENST00000355379 NCK2O43639 380 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 SRGAP2O75044 1071 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 CYP1A2P05177 515 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 P4HA1P13674 534 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 ZBTB6Q15916 424 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 FAM228AQ86W67 206 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 CYP3A43Q9HB55 503 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 CNTN3Q9P232 1028 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 RNF14Q9UBS8 474 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 GTF3C4Q9UKN8 822 aa24.41■■□□□ 1.5
SCAMP3-202ENST00000355379 FRMPD3Q5JV73 1810 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms