RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 HIST1H2AGP0C0S8 130 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 SRGNP10124 158 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 HIST1H2ADP20671 130 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 STAT4Q14765 748 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 PRMT1Q99873 361 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 PI4K2AQ9BTU6 479 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 KDM4CQ9H3R0 1056 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 UVRAGQ9P2Y5 699 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 JCADQ9P266 1359 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 MEFVO15553 781 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ERFP50548 548 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 CATSPER3Q86XQ3 398 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 PTPRN2Q92932 1015 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 GPBP1L1Q9HC44 474 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ARHGEF38Q9NXL2 777 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 SNX12Q9UMY4 172 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 RHOBTB3O94955 611 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 NPTXRO95502 500 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 HSPA9P38646 679 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 SPDYE7PQ495Y7 208 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 GPRC5AQ8NFJ5 357 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ATG4CQ96DT6 458 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ZC3H7BQ9UGR2 993 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 CLTCL1P53675 1640 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 GTPBP10A4D1E9 387 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 PHF2O75151 1096 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 SLC9A1P19634 815 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 NLRP11P59045 1033 aaKnown RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ANKS3Q6ZW76 656 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 LBHD1Q9BQE6 289 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-202ENST00000355133 NT5C1AQ9BXI3 368 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 AURKCQ9UQB9 309 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 CCDC22O60826 627 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 DPEP1P16444 411 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 GUCY1A3Q02108 690 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 SNX17Q15036 470 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 LONRF1Q17RB8 773 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 GOLGA7BQ2TAP0 167 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 EPC2Q52LR7 807 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 STOML1Q9UBI4 398 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 TRIM10Q9UDY6 481 aa13.88□□□□□ -0.19
SCN8A-202ENST00000355133 NDUFS3O75489 264 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 ETFBP38117 255 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 HUNKP57058 714 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 USP10Q14694 798 aaKnown RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 TERF2Q15554 542 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SV2CQ496J9 727 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 RBM15Q96T37 977 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 DEFB129Q9H1M3 183 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 STX18Q9P2W9 335 aaKnown RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 ARHGAP10A1A4S6 786 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 IL18RAPO95256 599 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 NTSR2O95665 410 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 CSF1RP07333 972 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 CYP2C19P33261 490 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 DAB2P98082 770 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 GLB1LQ6UWU2 654 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SCFD1Q8WVM8 642 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 ARHGEF26Q96DR7 871 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 TAAR1Q96RJ0 339 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SH3BP1Q9Y3L3 701 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 PDS5AQ29RF7 1337 aaKnown RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 CELF2O95319 508 aaKnown RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SLC25A27O95847 323 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 KLK7P49862 253 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 OCA2Q04671 838 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SMTNL2Q2TAL5 461 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 DCAF6Q58WW2 860 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 PCDHB8Q9UN66 801 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 NPEPPSP55786 919 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 ANTXR2P58335 489 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 KDSRQ06136 332 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 MAPRE2Q15555 327 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 USP49Q70CQ1 688 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 CDR2LQ86X02 465 aaPredicted RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 MTIF3Q9H2K0 278 aaKnown RBP13.87□□□□□ -0.19
SCN8A-202ENST00000355133 LATS2Q9NRM7 1088 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 KCNH7Q9NS40 1196 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SLC38A7Q9NVC3 462 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 SLC30A1Q9Y6M5 507 aa13.87□□□□□ -0.19
SCN8A-202ENST00000355133 ENO1P06733 434 aaKnown RBP13.86□□□□□ -0.19
SCN8A-202ENST00000355133 TWF1Q12792 350 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 MTM1Q13496 603 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 DGKDQ16760 1214 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms