RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 RBM44Q6ZP01 1051 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 GAB3Q8WWW8 586 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 BTBD6Q96KE9 485 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TRIM55Q9BYV6 548 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 KCNK13Q9HB14 408 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 SENP1Q9P0U3 644 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 B2RBV5 119 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 H3BRJ5 948 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 PDXKO00764 312 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 FSCN2O14926 492 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 CLIC2O15247 247 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 SPOPO43791 374 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ADRA1DP25100 572 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 MAGEA4P43358 317 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 GYG1P46976 350 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 CD97P48960 835 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ASPHQ12797 758 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TCEAL1Q15170 157 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ARHGAP44Q17R89 818 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 LRRC36Q1X8D7 754 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TRMT5Q32P41 509 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 SBK1Q52WX2 424 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 SFT2D3Q587I9 215 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 HYIQ5T013 277 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 KLHDC10Q6PID8 442 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 DNAJC14Q6Y2X3 702 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 SYDE1Q6ZW31 735 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 TDRPQ86YL5 185 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ZNF276Q8N554 614 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.31□□□□□ -1.08
CD46-203ENST00000354848 FBXO27Q8NI29 283 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 CCDC110Q8TBZ0 833 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 MORC4Q8TE76 937 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 DIS3LQ8TF46 1054 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 SLC20A1Q8WUM9 679 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 HAS1Q92839 578 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 CCDC97Q96F63 343 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 CLPTM1LQ96KA5 538 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 PRICKLE1Q96MT3 831 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 AGPAT1Q99943 283 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TMEM120AQ9BXJ8 343 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 ARHGEF38Q9NXL2 777 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 BTBD7Q9P203 1132 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 PCDHB13Q9Y5F0 798 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 MYH14Q7Z406 1995 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 TNS2Q63HR2 1409 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ASTN1O14525 1302 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 LAMB2P55268 1798 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 MAST2Q6P0Q8 1798 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 POTECB2RU33 542 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 SLC16A3O15427 465 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 ATMINO43313 823 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 TBL3Q12788 808 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 MSLNQ13421 630 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 DCTN2Q13561 401 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 SLC44A4Q53GD3 710 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TMPRSS6Q8IU80 811 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TMEM47Q9BQJ4 181 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 MXD3Q9BW11 206 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 MAK16Q9BXY0 300 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 CRNKL1Q9BZJ0 848 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 VAT1LQ9HCJ6 419 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 TIMMDC1Q9NPL8 285 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 INIPQ9NRY2 104 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ARMCX1Q9P291 453 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 STX8Q9UNK0 236 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ZNF804BA4D1E1 1349 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 KDM3AQ9Y4C1 1321 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 ADAMTSL3P82987 1691 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 ARFGEF1Q9Y6D6 1849 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 C2orf71A6NGG8 1288 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 SPDYE16A6NNV3 312 aaPredicted RBP8.3□□□□□ -1.08
CD46-203ENST00000354848 LRRN2O75325 713 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 CIB2O75838 187 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 SMIM18P0DKX4 95 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 VCLP18206 1134 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 DLG1Q12959 904 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 KIF22Q14807 665 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 C6orf163Q5TEZ5 329 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 DNAJC10Q8IXB1 793 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 CFAP57Q96MR6 1250 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 RBM15Q96T37 977 aaKnown RBP eCLIP8.3□□□□□ -1.082e-10■■■■□ 23.5
CD46-203ENST00000354848 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 SLC7A8Q9UHI5 535 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 MTO1Q9Y2Z2 717 aaKnown RBP8.3□□□□□ -1.08
CD46-203ENST00000354848 DCCP43146 1447 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 SPATA31A1Q5TZJ5 1347 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.3□□□□□ -1.08
CD46-203ENST00000354848 CCDC160A6NGH7 325 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 FCHO1O14526 889 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 TM7SF2O76062 418 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 ADAMTS2O95450 1211 aa8.3□□□□□ -1.08
CD46-203ENST00000354848 TFAP2AP05549 437 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms