RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ALDH5A1P51649 535 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-202ENST00000352393 SOX10P56693 466 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 TAS2R40P59535 323 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 C2CD6Q53TS8 623 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 ZNF365Q70YC5 407 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 RDM1Q8NG50 284 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 TBC1D31Q96DN5 1066 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 FAM213AQ9BRX8 229 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 EBF2Q9HAK2 575 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 WDR46O15213 610 aaKnown RBP26.06■■□□□ 1.76
CPNE1-202ENST00000352393 MYCLP12524 364 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-202ENST00000352393 KLRC2P26717 231 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 BPIFB4P59827 614 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 SRRM1Q8IYB3 904 aaKnown RBP26.06■■□□□ 1.76
CPNE1-202ENST00000352393 FITM2Q8N6M3 262 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 PDCD2LQ9BRP1 358 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 OSBPL8Q9BZF1 889 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 SLC38A10Q9HBR0 1119 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 NKIRAS1Q9NYS0 192 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 TBK1Q9UHD2 729 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 CLDN10P78369 228 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 STRN3Q13033 797 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 BRDTQ58F21 947 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-202ENST00000352393 PPP1R21Q6ZMI0 780 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 C9orf72Q96LT7 481 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 RMDN2Q96LZ7 410 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 FAM118BQ9BPY3 351 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 PNMA3Q9UL41 463 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 FER1L6Q2WGJ9 1857 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 POTEJP0CG39 1038 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 MTFR1Q15390 333 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 RNF43Q68DV7 783 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 SEPT14Q6ZU15 432 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 ASRGL1Q7L266 308 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 TAS1R3Q7RTX0 852 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 ANKS1BQ7Z6G8 1248 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 RIBC1Q8N443 379 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-202ENST00000352393 OGFOD1Q8N543 542 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 MOV10L1Q9BXT6 1211 aaKnown RBP26.05■■□□□ 1.76
CPNE1-202ENST00000352393 FOXP3Q9BZS1 431 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 PXMP2Q9NR77 195 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 ARHGEF3Q9NR81 526 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 PGAP2Q9UHJ9 254 aa26.05■■□□□ 1.76
CPNE1-202ENST00000352393 LIN9Q5TKA1 542 aa26.04■■□□□ 1.76
CPNE1-202ENST00000352393 ZCCHC9Q8N567 271 aaKnown RBP26.04■■□□□ 1.76
CPNE1-202ENST00000352393 EXD1Q8NHP7 514 aa26.04■■□□□ 1.76
CPNE1-202ENST00000352393 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-202ENST00000352393 CCDC77Q9BR77 488 aa26.04■■□□□ 1.76
CPNE1-202ENST00000352393 ZNF862O60290 1169 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 STBD1O95210 358 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 TAC1P20366 129 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 ACO1P21399 889 aaKnown RBP26.03■■□□□ 1.76
CPNE1-202ENST00000352393 DSG3P32926 999 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 NOMO3P69849 1222 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 MGAT5Q09328 741 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 ACVR2BQ13705 512 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 ZACNQ401N2 412 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 ACCSLQ4AC99 568 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 MAML1Q92585 1016 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 KLHL29Q96CT2 875 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 STAMBPL1Q96FJ0 436 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 L3MBTL3Q96JM7 780 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-202ENST00000352393 CEP170P1Q96L14 293 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 SENP7Q9BQF6 1050 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 C11orf70Q9BRQ4 267 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 HLA-DRAP01903 254 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 RTP1P59025 263 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 MAP3K10Q02779 954 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 TRIM72Q6ZMU5 477 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 FAM83AQ86UY5 434 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 ANKLE1Q8NAG6 615 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 AGAP11Q8TF27 550 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 RMDN3Q96TC7 470 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 PCDHA10Q9Y5I2 948 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 NFASCO94856 1347 aa26.03■■□□□ 1.76
CPNE1-202ENST00000352393 CFHP08603 1231 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 FOXN2P32314 431 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 CCDC15Q0P6D6 951 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 MAMLD1Q13495 774 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 PSMD6Q15008 389 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 PLEKHA7Q6IQ23 1121 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 CEP128Q6ZU80 1094 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 LPAR1Q92633 364 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 GRAMD1AQ96CP6 724 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 IFT74Q96LB3 600 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 XPNPEP1Q9NQW7 623 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 PDLIM7Q9NR12 457 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 ARHGAP28Q9P2N2 729 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 KIAA1217Q5T5P2 1943 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 TESPA1A2RU30 521 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-202ENST00000352393 EXTL3O43909 919 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 KRT16P08779 473 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 CCNB1P14635 433 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 MAGEA4P43358 317 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 WDR44Q5JSH3 913 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 TDRD10Q5VZ19 366 aaKnown RBP26.02■■□□□ 1.76
CPNE1-202ENST00000352393 LMBRD2Q68DH5 695 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-202ENST00000352393 LARGE2Q8N3Y3 721 aa26.02■■□□□ 1.76
CPNE1-202ENST00000352393 RBM15Q96T37 977 aaKnown RBP eCLIP26.02■■□□□ 1.762e-7■■■□□ 15.1
CPNE1-202ENST00000352393 MRPL47Q9HD33 250 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms