RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ASIC3Q9UHC3 531 aa15.86■□□□□ 0.13
TRAF3-202ENST00000351691 SYNPO2Q9UMS6 1093 aa15.86■□□□□ 0.13
TRAF3-202ENST00000351691 ZMYM2Q9UBW7 1377 aa15.86■□□□□ 0.13
TRAF3-202ENST00000351691 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
TRAF3-202ENST00000351691 UMODL1Q5DID0 1318 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L13C9JLJ4 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L11C9JVI0 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L18D6R9N7 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L22D6RA61 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L17D6RBQ6 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L19D6RCP7 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L20D6RJB6 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 FTLP02792 175 aaPredicted RBP15.85■□□□□ 0.13
TRAF3-202ENST00000351691 ARHGAP4P98171 946 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L24Q0WX57 530 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 RASA2Q15283 850 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 HHATQ5VTY9 493 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 RFWD3Q6PCD5 774 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 USP17L6PQ6QN14 398 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 FAM186BQ8IYM0 893 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 ETNPPLQ8TBG4 499 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 PTCD3Q96EY7 689 aaKnown RBP15.85■□□□□ 0.13
TRAF3-202ENST00000351691 MASTLQ96GX5 879 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 INTS2Q9H0H0 1204 aaKnown RBP15.85■□□□□ 0.13
TRAF3-202ENST00000351691 DNAJB4Q9UDY4 337 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 ANAPC5Q9UJX4 755 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 ANGPTL2Q9UKU9 493 aa15.85■□□□□ 0.13
TRAF3-202ENST00000351691 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRAF3-202ENST00000351691 FOXO6A8MYZ6 492 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 MEIS2O14770 477 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 EIF3DO15371 548 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRAF3-202ENST00000351691 MED24O75448 989 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 KRT36O76013 467 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 GAS8O95995 478 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 LYNP07948 512 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 MMP10P09238 476 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 RPA1P27694 616 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 CIITAP33076 1130 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 NFIAQ12857 509 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 DSTYKQ6XUX3 929 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 STMN2Q93045 179 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 PDGFDQ9GZP0 370 aaPredicted RBP15.84■□□□□ 0.13
TRAF3-202ENST00000351691 ZCWPW1Q9H0M4 648 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
TRAF3-202ENST00000351691 ZHX3Q9H4I2 956 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 DNM3Q9UQ16 869 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 F8W8V4 182 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 ZSCAN9O15535 394 aaPredicted RBP15.84■□□□□ 0.13
TRAF3-202ENST00000351691 EXOC3O60645 756 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 DNAJC6O75061 913 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 TBX10O75333 385 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 ATF2P15336 505 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 CHRNB2P17787 502 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 SREBF1P36956 1147 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 SESN3P58005 492 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 MCL1Q07820 350 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 MESDQ14696 234 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 KRT72Q14CN4 511 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 PHLDB3Q6NSJ2 640 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 CCNJLQ8IV13 435 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 ARHGAP24Q8N264 748 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 PSPC1Q8WXF1 523 aaKnown RBP15.84■□□□□ 0.13
TRAF3-202ENST00000351691 NSL1Q96IY1 281 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 TTC25Q96NG3 672 aa15.84■□□□□ 0.13
TRAF3-202ENST00000351691 TROVE2P10155 538 aaKnown RBP eCLIP15.83■□□□□ 0.13
TRAF3-202ENST00000351691 PIM1P11309 404 aaPredicted RBP15.83■□□□□ 0.13
TRAF3-202ENST00000351691 GZMAP12544 262 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 SPIRE1Q08AE8 756 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 SLC15A2Q16348 729 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 WDR72Q3MJ13 1102 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 LIN52Q52LA3 116 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 SGO2Q562F6 1265 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 RASIP1Q5U651 963 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 PALB2Q86YC2 1186 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 SLCO1B3Q9NPD5 702 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 SEPT11Q9NVA2 429 aaKnown RBP15.83■□□□□ 0.13
TRAF3-202ENST00000351691 TBK1Q9UHD2 729 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 CIDEBQ9UHD4 219 aa15.83■□□□□ 0.13
TRAF3-202ENST00000351691 CYP3A4P08684 503 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 GAP43P17677 238 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 CDK7P50613 346 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 TNIP1Q15025 636 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 TMED2Q15363 201 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 FAM91A1Q658Y4 838 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 SEPT14Q6ZU15 432 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 HS2ST1Q7LGA3 356 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 OTOAQ7RTW8 1153 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 CFAP57Q96MR6 1250 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 PLEKHG4BQ96PX9 1271 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 POP1Q99575 1024 aaKnown RBP15.83■□□□□ 0.12
TRAF3-202ENST00000351691 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 POLR3CQ9BUI4 534 aaPredicted RBP15.83■□□□□ 0.12
TRAF3-202ENST00000351691 TRABDQ9H4I3 376 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 OLFML3Q9NRN5 406 aa15.83■□□□□ 0.12
TRAF3-202ENST00000351691 KRT82Q9NSB4 513 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms