RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 ITGA11Q9UKX5 1188 aa15.07■□□□□ 0
SEC13-202ENST00000350697 NUB1Q9Y5A7 615 aa15.07■□□□□ 0
SEC13-202ENST00000350697 PTPRJQ12913 1337 aa15.07■□□□□ 0
SEC13-202ENST00000350697 PIRO00625 290 aa15.06■□□□□ 0
SEC13-202ENST00000350697 FSCN2O14926 492 aa15.06■□□□□ 0
SEC13-202ENST00000350697 CSPG5O95196 566 aa15.06■□□□□ 0
SEC13-202ENST00000350697 CTSAP10619 480 aa15.06■□□□□ 0
SEC13-202ENST00000350697 PAX3P23760 479 aa15.06■□□□□ 0
SEC13-202ENST00000350697 IGFBP6P24592 240 aaPredicted RBP15.06■□□□□ 0
SEC13-202ENST00000350697 IRS1P35568 1242 aa15.06■□□□□ 0
SEC13-202ENST00000350697 AP3M2P53677 418 aa15.06■□□□□ 0
SEC13-202ENST00000350697 CLDN10P78369 228 aa15.06■□□□□ 0
SEC13-202ENST00000350697 USP41Q3LFD5 358 aa15.06■□□□□ 0
SEC13-202ENST00000350697 FILIP1Q7Z7B0 1213 aa15.06■□□□□ 0
SEC13-202ENST00000350697 CSGALNACT2Q8N6G5 542 aa15.06■□□□□ 0
SEC13-202ENST00000350697 C1orf127Q8N9H9 656 aa15.06■□□□□ 0
SEC13-202ENST00000350697 OR5B17Q8NGF7 314 aa15.06■□□□□ 0
SEC13-202ENST00000350697 ATG2AQ2TAZ0 1938 aa15.05■□□□□ 0
SEC13-202ENST00000350697 LRRIQ3A6PVS8 624 aaPredicted RBP15.05■□□□□ -0
SEC13-202ENST00000350697 PPEF2O14830 753 aa15.05■□□□□ -0
SEC13-202ENST00000350697 IKBKBO14920 756 aa15.05■□□□□ -0
SEC13-202ENST00000350697 LETM1O95202 739 aaPredicted RBP15.05■□□□□ -0
SEC13-202ENST00000350697 ITGB3P05106 788 aa15.05■□□□□ -0
SEC13-202ENST00000350697 URODP06132 367 aa15.05■□□□□ -0
SEC13-202ENST00000350697 ERCC5P28715 1186 aaPredicted RBP15.05■□□□□ -0
SEC13-202ENST00000350697 GLUD2P49448 558 aa15.05■□□□□ -0
SEC13-202ENST00000350697 VAMP7P51809 220 aa15.05■□□□□ -0
SEC13-202ENST00000350697 MCCD1P59942 119 aaPredicted RBP15.05■□□□□ -0
SEC13-202ENST00000350697 BFSP1Q12934 665 aa15.05■□□□□ -0
SEC13-202ENST00000350697 SMC1AQ14683 1233 aaKnown RBP15.05■□□□□ -0
SEC13-202ENST00000350697 FAM171A1Q5VUB5 890 aa15.05■□□□□ -0
SEC13-202ENST00000350697 PLPP4Q5VZY2 271 aa15.05■□□□□ -0
SEC13-202ENST00000350697 KIAA1841Q6NSI8 718 aa15.05■□□□□ -0
SEC13-202ENST00000350697 TAS1R1Q7RTX1 841 aa15.05■□□□□ -0
SEC13-202ENST00000350697 TRAPPC11Q7Z392 1133 aa15.05■□□□□ -0
SEC13-202ENST00000350697 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
SEC13-202ENST00000350697 BORCS6Q96GS4 357 aa15.05■□□□□ -0
SEC13-202ENST00000350697 FAM84AQ96KN4 292 aa15.05■□□□□ -0
SEC13-202ENST00000350697 SUSD3Q96L08 255 aa15.05■□□□□ -0
SEC13-202ENST00000350697 ZNF560Q96MR9 790 aa15.05■□□□□ -0
SEC13-202ENST00000350697 NSUN3Q9H649 340 aaKnown RBP15.05■□□□□ -0
SEC13-202ENST00000350697 CHST7Q9NS84 486 aa15.05■□□□□ -0
SEC13-202ENST00000350697 ANO10Q9NW15 660 aa15.05■□□□□ -0
SEC13-202ENST00000350697 AGAP1Q9UPQ3 857 aa15.05■□□□□ -0
SEC13-202ENST00000350697 SSX2IPQ9Y2D8 614 aa15.05■□□□□ -0
SEC13-202ENST00000350697 R3HCC1Q9Y3T6 440 aaKnown RBP15.05■□□□□ -0
SEC13-202ENST00000350697 IRAK3Q9Y616 596 aa15.05■□□□□ -0
SEC13-202ENST00000350697 SCN1AP35498 2009 aa15.05■□□□□ -0
SEC13-202ENST00000350697 FGFR1OPO95684 399 aaKnown RBP15.04■□□□□ -0
SEC13-202ENST00000350697 CXCL14O95715 111 aa15.04■□□□□ -0
SEC13-202ENST00000350697 KRT19P08727 400 aa15.04■□□□□ -0
SEC13-202ENST00000350697 POLR2BP30876 1174 aaKnown RBP15.04■□□□□ -0
SEC13-202ENST00000350697 PNPLA4P41247 253 aa15.04■□□□□ -0
SEC13-202ENST00000350697 BRCC3P46736 316 aa15.04■□□□□ -0
SEC13-202ENST00000350697 AARSP49588 968 aaKnown RBP eCLIP15.04■□□□□ -0
SEC13-202ENST00000350697 TAF6P49848 677 aa15.04■□□□□ -0
SEC13-202ENST00000350697 LILRA4P59901 499 aa15.04■□□□□ -0
SEC13-202ENST00000350697 DLG4P78352 724 aa15.04■□□□□ -0
SEC13-202ENST00000350697 RBP5P82980 135 aa15.04■□□□□ -0
SEC13-202ENST00000350697 DSG1Q02413 1049 aa15.04■□□□□ -0
SEC13-202ENST00000350697 PTPN14Q15678 1187 aa15.04■□□□□ -0
SEC13-202ENST00000350697 STX1AQ16623 288 aa15.04■□□□□ -0
SEC13-202ENST00000350697 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.04■□□□□ -0
SEC13-202ENST00000350697 GPR65Q8IYL9 337 aa15.04■□□□□ -0
SEC13-202ENST00000350697 MICALL1Q8N3F8 863 aa15.04■□□□□ -0
SEC13-202ENST00000350697 MRPL43Q8N983 215 aaKnown RBP15.04■□□□□ -0
SEC13-202ENST00000350697 CXorf38Q8TB03 319 aa15.04■□□□□ -0
SEC13-202ENST00000350697 ZNF516Q92618 1163 aa15.04■□□□□ -0
SEC13-202ENST00000350697 TTPALQ9BTX7 342 aa15.04■□□□□ -0
SEC13-202ENST00000350697 SRRTQ9BXP5 876 aaKnown RBP15.04■□□□□ -0
SEC13-202ENST00000350697 METTL14Q9HCE5 456 aaKnown RBP15.04■□□□□ -0
SEC13-202ENST00000350697 MRPL17Q9NRX2 175 aaKnown RBP15.04■□□□□ -0
SEC13-202ENST00000350697 ARMCX3Q9UH62 379 aaPredicted RBP15.04■□□□□ -0
SEC13-202ENST00000350697 SIX4Q9UIU6 781 aa15.04■□□□□ -0
SEC13-202ENST00000350697 STXBP5LQ9Y2K9 1186 aa15.04■□□□□ -0
SEC13-202ENST00000350697 I3L4J1 428 aa15.03■□□□□ -0
SEC13-202ENST00000350697 SYN3O14994 580 aa15.03■□□□□ -0
SEC13-202ENST00000350697 GNA14O95837 355 aa15.03■□□□□ -0
SEC13-202ENST00000350697 FGFR3P22607 806 aa15.03■□□□□ -0
SEC13-202ENST00000350697 CA8P35219 290 aa15.03■□□□□ -0
SEC13-202ENST00000350697 SV2CQ496J9 727 aa15.03■□□□□ -0
SEC13-202ENST00000350697 KIAA0319Q5VV43 1072 aa15.03■□□□□ -0
SEC13-202ENST00000350697 FRMD5Q7Z6J6 570 aa15.03■□□□□ -0
SEC13-202ENST00000350697 CEP57Q86XR8 500 aa15.03■□□□□ -0
SEC13-202ENST00000350697 LRRC52Q8N7C0 313 aa15.03■□□□□ -0
SEC13-202ENST00000350697 AUTS2Q8WXX7 1259 aa15.03■□□□□ -0
SEC13-202ENST00000350697 B3GALT6Q96L58 329 aa15.03■□□□□ -0
SEC13-202ENST00000350697 MED15Q96RN5 788 aa15.03■□□□□ -0
SEC13-202ENST00000350697 PCDHGC5Q9Y5F6 944 aa15.03■□□□□ -0
SEC13-202ENST00000350697 VWA8A3KMH1 1905 aa15.03■□□□□ -0
SEC13-202ENST00000350697 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.02■□□□□ -0
SEC13-202ENST00000350697 C2orf71A6NGG8 1288 aa15.02■□□□□ -0
SEC13-202ENST00000350697 HIDE1A8MVS5 230 aa15.02■□□□□ -0
SEC13-202ENST00000350697 M0QZQ0 153 aa15.02■□□□□ -0
SEC13-202ENST00000350697 C2CD2LO14523 706 aa15.02■□□□□ -0
SEC13-202ENST00000350697 SPTLC1O15269 473 aa15.02■□□□□ -0
SEC13-202ENST00000350697 STX10O60499 249 aa15.02■□□□□ -0
SEC13-202ENST00000350697 LILRB3O75022 631 aa15.02■□□□□ -0
SEC13-202ENST00000350697 PHACTR2O75167 634 aa15.02■□□□□ -0
SEC13-202ENST00000350697 C4BPAP04003 597 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms