RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TAF6P49848 677 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 SLC12A2P55011 1212 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ACVR2BQ13705 512 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 LMBRD2Q68DH5 695 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 HPDLQ96IR7 371 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 UBN1Q9NPG3 1134 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 H3BRJ5 948 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 M0R2N6 131 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 FAM102AQ5T9C2 384 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ARRDC4Q8NCT1 418 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 SMC6Q96SB8 1091 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CAPS2Q9BXY5 557 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CARD9Q9H257 536 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 PPANQ9NQ55 473 aaKnown RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 SCN7AQ01118 1682 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 STX2P32856 288 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 NOVP48745 357 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 SNX1Q13596 522 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 ZNF662Q6ZS27 426 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 ST6GALNAC4Q9H4F1 302 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 CCDC88AQ3V6T2 1871 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
SMAD9-201ENST00000350148 NPTXRO95502 500 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 VDRP11473 427 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 SLC8A1P32418 973 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 RAB27AP51159 221 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
SMAD9-201ENST00000350148 LRRC55Q6ZSA7 311 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 KIFC3Q9BVG8 833 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 ZWILCHQ9H900 591 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 SLC45A1Q9Y2W3 748 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 INSRRP14616 1297 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 PAX3P23760 479 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 ARL4CP56559 192 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 SATB1Q01826 763 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 GRIK4Q16099 956 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 VIPAS39Q9H9C1 493 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 ADAM21Q9UKJ8 722 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 LRP5O75197 1615 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 CES2O00748 559 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 SRGAP2O75044 1071 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
SMAD9-201ENST00000350148 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
SMAD9-201ENST00000350148 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
SMAD9-201ENST00000350148 PHF2O75151 1096 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CPP00450 1065 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 EFHC2Q5JST6 749 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 C4orf22Q6V702 233 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 TADA2BQ86TJ2 420 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CFAP69A5D8W1 941 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CABYRO75952 493 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 INHBAP08476 426 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CENPCQ03188 943 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 INPP5FQ9Y2H2 1132 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 A0A0G2JLL6 359 aaPredicted RBP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 PJA2O43164 708 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 NCK2O43639 380 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 BMP6P22004 513 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 PSMC4P43686 418 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 CLCN3P51790 818 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 GLB1LQ6UWU2 654 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 PRRT2Q7Z6L0 340 aaPredicted RBP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 TPCN2Q8NHX9 752 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 RAB3IL1Q8TBN0 382 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 HSPH1Q92598 858 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 SEPT10Q9P0V9 454 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 SIK3Q9Y2K2 1263 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 ATP8A1Q9Y2Q0 1164 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 HOXA2O43364 376 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 PRKCIP41743 596 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 DCP1BQ8IZD4 617 aaKnown RBP12.85□□□□□ -0.35
SMAD9-201ENST00000350148 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
SMAD9-201ENST00000350148 ZNF668Q96K58 619 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms