RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 LDHDQ86WU2 507 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 DCP2Q8IU60 420 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 C1orf131Q8NDD1 294 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 USP33Q8TEY7 942 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 AENQ8WTP8 325 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 SCLYQ96I15 445 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 CCDC114Q96M63 670 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 TRIM39Q9HCM9 518 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 CLDND1Q9NY35 253 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 CPSF2Q9P2I0 782 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 NUDT5Q9UKK9 219 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 SIT1Q9Y3P8 196 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 QSER1Q2KHR3 1735 aa8.43□□□□□ -1.06
UBE2D3-204ENST00000349311 TTC36A6NLP5 189 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 AGPSO00116 658 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 PSMD14O00487 310 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 MPHOSPH10O00566 681 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 IRS4O14654 1257 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 SNUPNO95149 360 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 TNFRSF8P28908 595 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 GCKP35557 465 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 PLCD1P51178 756 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 EPHB4P54760 987 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 ITIH3Q06033 890 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 TCIRG1Q13488 830 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 NAA25Q14CX7 972 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 PDCD2Q16342 344 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 SKIDA1Q1XH10 827 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 EMC10Q5UCC4 262 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 RESP18Q5W5W9 173 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 EMBQ6PCB8 327 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 KIF6Q6ZMV9 814 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 TTLL7Q6ZT98 887 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 SYNPOQ8N3V7 929 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 FBXL16Q8N461 479 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 ARFGAP2Q8N6H7 521 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 CCHCR1Q8TD31 782 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 ZNF473Q8WTR7 871 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 KAZALD1Q96I82 304 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 PPP1R16BQ96T49 567 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 MYD88Q99836 296 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 TMX4Q9H1E5 349 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 EPB41L1Q9H4G0 881 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 HAUS4Q9H6D7 363 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 RXFP1Q9HBX9 757 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 CWC25Q9NXE8 425 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 ZNF652Q9Y2D9 606 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 NFE2L3Q9Y4A8 694 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 SAR1BQ9Y6B6 198 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 ARAP2Q8WZ64 1704 aa8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 TNS1Q9HBL0 1735 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-204ENST00000349311 MROH7-TTC4A0A0A0MT08 1334 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 ANO9A1A5B4 782 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 N4BP3O15049 544 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 RFPL3O75679 317 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 SOD2P04179 222 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 C8AP07357 584 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 ATP5JP18859 108 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 GRK2P25098 689 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 GRK3P35626 688 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 PIP4K2AP48426 406 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 EXOSC10Q01780 885 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 PNOCQ13519 176 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 MTF1Q14872 753 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 NAA35Q5VZE5 725 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 PAPD7Q5XG87 772 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 ZNF772Q68DY9 489 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 CYP4F22Q6NT55 531 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 ZNF662Q6ZS27 426 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 IGDCC3Q8IVU1 814 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 APLFQ8IW19 511 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 CCDC13Q8IYE1 715 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 MMGT1Q8N4V1 131 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 CAGE1Q8TC20 777 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 KCNN1Q92952 543 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 CCDC47Q96A33 483 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 SAAL1Q96ER3 474 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 CDC5LQ99459 802 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 KRTAP4-12Q9BQ66 201 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 PLA2G12BQ9BX93 195 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 CENPHQ9H3R5 247 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 SLC6A20Q9NP91 592 aa8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 DDX20Q9UHI6 824 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 MRPL42Q9Y6G3 142 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-204ENST00000349311 ZMYM6O95789 1325 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 SH3TC1Q8TE82 1336 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 ENPP3O14638 875 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 LIN7AO14910 233 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 IPO7O95373 1038 aaKnown RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 C1QTNF9P0C862 333 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 GHRP10912 638 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 NAT1P18440 290 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PDIA3P30101 505 aaKnown RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PBX1P40424 430 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 GUCY1B3Q02153 619 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 SPAG1Q07617 926 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PTGISQ16647 500 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 MCMDC2Q4G0Z9 681 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms