RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ANK1P16157 1881 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 POLR3GO15318 223 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MARCKSL1P49006 195 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CARSP49589 748 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GRIK4Q16099 956 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MARCH8Q5T0T0 291 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PASD1Q8IV76 773 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 UBR7Q8N806 425 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CD101Q93033 1021 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NIF3L1Q9GZT8 377 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ACBD3Q9H3P7 528 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SLC5A4Q9NY91 659 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 HPCAL4Q9UM19 191 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MGAMO43451 1857 aa15.08■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZSWIM8A7E2V4 1837 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 IGF2BP3O00425 579 aaKnown RBP eCLIP15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 THAP12O43422 761 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 SPOPO43791 374 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 ZEB2O60315 1214 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 TNNC2P02585 160 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 RRM1P23921 792 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 SSTR3P32745 418 aaPredicted RBP15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 PEX5P50542 639 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 TNFAIP2Q03169 654 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 C2CD6Q53TS8 623 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 EMBQ6PCB8 327 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 TRIM72Q6ZMU5 477 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 SND1Q7KZF4 910 aaKnown RBP eCLIP15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 CPNE8Q86YQ8 564 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 NLRP7Q8WX94 980 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 IFT81Q8WYA0 676 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 ANKRD36BP1Q96IX9 119 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 CPB2Q96IY4 423 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 NAP1L3Q99457 506 aaPredicted RBP15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 WNT8AQ9H1J5 351 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 AVENQ9NQS1 362 aaPredicted RBP15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 NR2E1Q9Y466 385 aa15.08■□□□□ 0
CDK5RAP1-202ENST00000346416 IL18RAPO95256 599 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 STAG3L1P0CL83 205 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 MYBL1P10243 752 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ARF4P18085 180 aaPredicted RBP15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 CD58P19256 250 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ZNF132P52740 706 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 NOMO3P69849 1222 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 TRADDQ15628 312 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ZNF699Q32M78 642 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 PRAMEF19Q5SWL8 479 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 CASKIN2Q8WXE0 1202 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 TRIM11Q96F44 468 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ZMYND15Q9H091 742 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 XYLT2Q9H1B5 865 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 PDZD7Q9H5P4 517 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 CISHQ9NSE2 258 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ANAPC7Q9UJX3 599 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 NFU1Q9UMS0 254 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ITGBL1O95965 494 aaPredicted RBP15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 MCF2P10911 925 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ZNF157P51786 506 aaPredicted RBP15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 MORN1Q5T089 497 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 AADACL2Q6P093 401 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 MON1BQ7L1V2 547 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ADAT2Q7Z6V5 191 aaKnown RBP15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 PHLDB2Q86SQ0 1253 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 KIAA0319LQ8IZA0 1049 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ZNF606Q8WXB4 792 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 CCDC102AQ96A19 550 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 SCLT1Q96NL6 688 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 SLITRK6Q9H5Y7 841 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 NMRK2Q9NPI5 230 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 AMACRQ9UHK6 382 aa15.07■□□□□ 0
CDK5RAP1-202ENST00000346416 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 CCDC66A2RUB6 948 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 LACTBL1A8MY62 500 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 DYNC1LI2O43237 492 aaPredicted RBP15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 NFICP08651 508 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 WEE2P0C1S8 567 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 CTNNA1P35221 906 aaKnown RBP15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 FAM193AP78312 1265 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 MAP2K5Q13163 448 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 PAK2Q13177 524 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 CLUL1Q15846 466 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 ZNF394Q53GI3 561 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 LLGL2Q6P1M3 1020 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 C11orf70Q9BRQ4 267 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 TRIM7Q9C029 511 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 SETD4Q9NVD3 440 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 ADAM22Q9P0K1 906 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 MROH7Q68CQ1 1323 aa15.06■□□□□ 0
CDK5RAP1-202ENST00000346416 MEFVO15553 781 aaPredicted RBP15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 KRT19P08727 400 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 ASPAP45381 313 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 AARSP49588 968 aaKnown RBP eCLIP15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 TERF2Q15554 542 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 HSP90B2PQ58FF3 399 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 SCARA5Q6ZMJ2 495 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 RASAL3Q86YV0 1011 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 CCDC26Q8TAB7 109 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 CAVIN3Q969G5 261 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 FLRT1Q9NZU1 646 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms