RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 EFCAB12Q6NXP0 572 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF771Q7L3S4 317 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 VPS36Q86VN1 386 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PALB2Q86YC2 1186 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PPM1KQ8N3J5 372 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 RNF10Q8N5U6 811 aaKnown RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 FBXL13Q8NEE6 735 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 HELQQ8TDG4 1101 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SLC20A1Q8WUM9 679 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 TCP11Q8WWU5 503 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 GOLGA1Q92805 767 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ALS2CR12Q96Q35 445 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PI4K2AQ9BTU6 479 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PDE11AQ9HCR9 933 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 RAB20Q9NX57 234 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 JRKLQ9Y4A0 524 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 DAAM1Q9Y4D1 1078 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ADGRA2Q96PE1 1338 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ADCY6O43306 1168 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PALMO75781 387 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 IL2RAP01589 272 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 INSRRP14616 1297 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SCP2P22307 547 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 MAPK4P31152 587 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 CBX1P83916 185 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 MXD4Q14582 209 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PSMD6Q15008 389 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 C10orf76Q5T2E6 689 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SLFN12LQ6IEE8 588 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 C15orf39Q6ZRI6 1047 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 USP37Q86T82 979 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PPTC7Q8NI37 304 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 NLRP4Q96MN2 994 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 MMS19Q96T76 1030 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PSMB7Q99436 277 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 TINF2Q9BSI4 451 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 KIAA1586Q9HCI6 787 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ACP6Q9NPH0 428 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 RBAKQ9NYW8 714 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SNX12Q9UMY4 172 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 GAS2O43903 313 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 SGPL1O95470 568 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 C22orf31O95567 290 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 PRKCBP05771 671 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 TNNI1P19237 187 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 TNFAIP3P21580 790 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 TNFSF9P41273 254 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 EFNA5P52803 228 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 PRPF4BQ13523 1007 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 ACVR2BQ13705 512 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 PRAMEF19Q5SWL8 479 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 TDRD10Q5VZ19 366 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 ZBTB8OSQ8IWT0 167 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 NOA1Q8NC60 698 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 COG1Q8WTW3 980 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 FNBP1Q96RU3 617 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 ACO2Q99798 780 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 PLCD4Q9BRC7 762 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 MRPL4Q9BYD3 311 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 SEPT11Q9NVA2 429 aaKnown RBP9.93□□□□□ -0.82
ATG4A-202ENST00000345734 TAS2R14Q9NYV8 317 aa9.93□□□□□ -0.82
ATG4A-202ENST00000345734 CNTNAP2Q9UHC6 1331 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CTAGE15A4D2H0 777 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 GRID2IPA4D2P6 1211 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 SLC15A5A6NIM6 579 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 A6NJY4 79 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 PDE2AO00408 941 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 KIAA0391O15091 583 aaKnown RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CLDN3O15551 220 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CYP26A1O43174 497 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 FTCDO95954 541 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 C4BPAP04003 597 aaKnown RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 H2AFZP0C0S5 128 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CCDC172P0C7W6 258 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CTAGE8P0CG41 777 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 H2AFXP16104 143 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CXCR5P32302 372 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 GALCP54803 685 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ENPEPQ07075 957 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 NNTQ13423 1086 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 SCARA3Q6AZY7 606 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 H2AFVQ71UI9 128 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CTAGE6Q86UF2 777 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CTAGE4Q8IX94 777 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 EXOC8Q8IYI6 725 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 FAM71AQ8IYT1 594 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 DHX38Q92620 1227 aaKnown RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 RABGGTAQ92696 567 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 NT5C1BQ96P26 610 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 PPP1R16BQ96T49 567 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 AGPAT1Q99943 283 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 C16orf70Q9BSU1 422 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 TLR10Q9BXR5 811 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 GOLPH3Q9H4A6 298 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 MINDY3Q9H8M7 445 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 DCTN4Q9UJW0 460 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ANK1P16157 1881 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms