RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 PREPLQ4J6C6 727 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 ZNF667Q5HYK9 610 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 RIBC1Q8N443 379 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 TMEM143Q96AN5 459 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 DDX56Q9NY93 547 aaKnown RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 STRIP2Q9ULQ0 834 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 DISP2A7MBM2 1401 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 O00370 1275 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 SNX3O60493 162 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 DGAT1O75907 488 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 NUDT17P0C025 328 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 OVGP1Q12889 678 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 NSUN6Q8TEA1 469 aaKnown RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 ZNF668Q96K58 619 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 NLRP4Q96MN2 994 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 ZDHHC15Q96MV8 337 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 ADPGKQ9BRR6 497 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 TSSK1BQ9BXA7 367 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 RXFP1Q9HBX9 757 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 CHST7Q9NS84 486 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 KRT4P19013 534 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 CNGA2Q16280 664 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 MAP3K21Q5TCX8 1036 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 C1orf146Q5VVC0 180 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 C1orf131Q8NDD1 294 aaKnown RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 QTRT2Q9H974 415 aaKnown RBP16.41■□□□□ 0.22
PTPRU-201ENST00000345512 NR2E1Q9Y466 385 aa16.41■□□□□ 0.22
PTPRU-201ENST00000345512 CYP3A7-CYP3A51PA0A087WV96 503 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 NCF2P19878 526 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-201ENST00000345512 CYP3A7P24462 503 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 ALDH5A1P51649 535 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-201ENST00000345512 SV2AQ7L0J3 742 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 SPATA24Q86W54 205 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 RASGEF1CQ8N431 466 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 KRT38O76015 456 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 TFDP2Q14188 446 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 TTC16Q8NEE8 873 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 SMYD3Q9H7B4 428 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 SKAP2O75563 359 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-201ENST00000345512 SPP2Q13103 211 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 MYBPC2Q14324 1141 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 WDR75Q8IWA0 830 aaKnown RBP16.4■□□□□ 0.22
PTPRU-201ENST00000345512 FEZF2Q8TBJ5 459 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 DEPDC1BQ8WUY9 529 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 OSBPL7Q9BZF2 842 aa16.4■□□□□ 0.22
PTPRU-201ENST00000345512 CCDC22O60826 627 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 KRT3P12035 628 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 PGM1P36871 562 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 DRG2P55039 364 aaKnown RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 EIF3EP60228 445 aaKnown RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 NCOA4Q13772 614 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 KIF22Q14807 665 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 VPS72Q15906 364 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 C7orf31Q8N865 590 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 EPS8L1Q8TE68 723 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 KLC2Q9H0B6 622 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 LRRC4BQ9NT99 713 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 CHMP2BQ9UQN3 213 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 NCANO14594 1321 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 MUTP22033 750 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 SNRPFP62306 86 aaKnown RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 BAATQ14032 418 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 NUDCD3Q8IVD9 361 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 PRCCQ92733 491 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 G3BP2Q9UN86 482 aaKnown RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 C5P01031 1676 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 TMEM150BA6NC51 233 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 DNM1LO00429 736 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 NPTX2P47972 431 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 KLC1Q07866 573 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 CCNYQ8ND76 341 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 GMCL1P1Q8NEA9 526 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 RNF34Q969K3 372 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 FAM149B1Q96BN6 582 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 PCYOX1Q9UHG3 505 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 COMMD10Q9Y6G5 202 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 ROBO3Q96MS0 1386 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 KCNJ2P63252 427 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 KDSRQ06136 332 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 MAP7Q14244 749 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 SURF1Q15526 300 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 MDH1BQ5I0G3 518 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 DNAJC9Q8WXX5 260 aa16.39■□□□□ 0.21
PTPRU-201ENST00000345512 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-201ENST00000345512 ATXN2Q99700 1313 aaKnown RBP16.38■□□□□ 0.21
PTPRU-201ENST00000345512 MYH10P35580 1976 aa16.38■□□□□ 0.21
PTPRU-201ENST00000345512 CST8O60676 142 aa16.38■□□□□ 0.21
PTPRU-201ENST00000345512 ARL1P40616 181 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-201ENST00000345512 RARRES1P49788 294 aa16.38■□□□□ 0.21
PTPRU-201ENST00000345512 EPHB1P54762 984 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms