RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 INO80B-WBP1J3KQ70 363 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 SOX11P35716 441 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 RGS2P41220 211 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 TRIM72Q6ZMU5 477 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CDKL3Q8IVW4 592 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 TERB1Q8NA31 727 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 RFWD2Q8NHY2 731 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 JADE3Q92613 823 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ZBED2Q9BTP6 218 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 INO80BQ9C086 356 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ITGB3BPQ13352 177 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 KLHDC7AQ5VTJ3 777 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 TSHZ1Q6ZSZ6 1077 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ASPSCR1Q9BZE9 553 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 BFARQ9NZS9 450 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ZNF212Q9UDV6 495 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CDYLQ9Y232 598 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ASXL2Q76L83 1435 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L15C9J2P7 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L13C9JLJ4 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L11C9JVI0 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L18D6R9N7 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L22D6RA61 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L17D6RBQ6 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L19D6RCP7 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L20D6RJB6 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 APRTP07741 180 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 PTDSS1P48651 473 aaKnown RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 FMO5P49326 533 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CENPCQ03188 943 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L24Q0WX57 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 AP3B2Q13367 1082 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L6PQ6QN14 398 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 MAP3K14Q99558 947 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 EML4Q9HC35 981 aaKnown RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CHORDC1Q9UHD1 332 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-202ENST00000345356 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CDY2AQ9Y6F7 541 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CDY1Q9Y6F8 540 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 SLC16A4O15374 487 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 ALBP02768 609 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 CIITAP33076 1130 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 C21orf59P57076 290 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 RINLQ6ZS11 566 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 ZSWIM1Q9BR11 485 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 TPST1O60507 370 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 CDH6P55285 790 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
COL12A1-202ENST00000345356 DMC1Q14565 340 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
COL12A1-202ENST00000345356 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 SNX13Q9Y5W8 968 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 ZBTB39O15060 712 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 MTERF2Q49AM1 385 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 LAYNQ6UX15 382 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 CREG2Q8IUH2 290 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 SEL1LQ9UBV2 794 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 GRID1Q9ULK0 1009 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 SRRM3A6NNA2 597 aaPredicted RBP12.69□□□□□ -0.38
COL12A1-202ENST00000345356 TRIM49D1C9J1S8 452 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
COL12A1-202ENST00000345356 KCNN4O15554 427 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 TNFAIP8O95379 198 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 SNAP25P60880 206 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 FIGNQ5HY92 759 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 SYDE2Q5VT97 1194 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 CPA5Q8WXQ8 436 aa12.69□□□□□ -0.38
COL12A1-202ENST00000345356 CNOT7Q9UIV1 285 aaKnown RBP12.69□□□□□ -0.38
COL12A1-202ENST00000345356 C1orf232A0A0U1RR37 186 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SRGAP2CP0DJJ0 459 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 AQP5P55064 265 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SF3B3Q15393 1217 aaKnown RBP12.68□□□□□ -0.38
COL12A1-202ENST00000345356 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 THAP2Q9H0W7 228 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 COMMD3-BMI1R4GMX3 469 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SPAG6O75602 509 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 KCNA1Q09470 495 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
COL12A1-202ENST00000345356 CCDC81Q6ZN84 652 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 TMPRSS6Q8IU80 811 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 PCYOX1LQ8NBM8 494 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms