RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 KRT19P08727 400 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 STX17P56962 302 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 ADGRD2Q7Z7M1 963 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 FAM186BQ8IYM0 893 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 CSGALNACT2Q8N6G5 542 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 MRPL43Q8N983 215 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 FAM84AQ96KN4 292 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 CGRRF1Q99675 332 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 TLE6Q9H808 572 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 SSX2IPQ9Y2D8 614 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 ATG2AQ2TAZ0 1938 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 PPEF2O14830 753 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 ITGB3P05106 788 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 KRT13P13646 458 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 USP37Q86T82 979 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 RNF168Q8IYW5 571 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 MLKLQ8NB16 471 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 OR5B17Q8NGF7 314 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 TTPALQ9BTX7 342 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 C2orf71A6NGG8 1288 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 PER2O15055 1255 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 EFEMP2O95967 443 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 EPB41P11171 864 aaKnown RBP22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 POLR2BP30876 1174 aaKnown RBP22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 NRIP1P48552 1158 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 PTPN14Q15678 1187 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 CD300LGQ6UXG3 332 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 C1orf127Q8N9H9 656 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 PARD3BQ8TEW8 1205 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 RIN2Q8WYP3 895 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 SYAP1Q96A49 352 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 CHST7Q9NS84 486 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 ITGA11Q9UKX5 1188 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 AGAP1Q9UPQ3 857 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 PTPRJQ12913 1337 aa22.48■■□□□ 1.19
SMARCB1-202ENST00000344921 ANO9A1A5B4 782 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 PIRO00625 290 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 MAPK13O15264 365 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 NLRP12P59046 1061 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 DSG1Q02413 1049 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 CAVIN1Q6NZI2 390 aaKnown RBP22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 DSTYKQ6XUX3 929 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 EP400NLQ6ZTU2 488 aa22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 INTS8Q75QN2 995 aaKnown RBP22.47■■□□□ 1.19
SMARCB1-202ENST00000344921 VAMP7P51809 220 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 LILRA4P59901 499 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 RTP2Q5QGT7 225 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 SASS6Q6UVJ0 657 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 ZNF560Q96MR9 790 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 EMILIN2Q9BXX0 1053 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 TMEM63CQ9P1W3 806 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 DACH1Q9UI36 760 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 IRAK3Q9Y616 596 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 REV3LO60673 3130 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 COL6A3P12111 3177 aa22.46■■□□□ 1.19
SMARCB1-202ENST00000344921 LRRIQ3A6PVS8 624 aaPredicted RBP22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 PHACTR2O75167 634 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 TKTP29401 623 aaKnown RBP22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 GTF2F1P35269 517 aaKnown RBP eCLIP22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 TAF6P49848 677 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 DLG4P78352 724 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 RBP5P82980 135 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 DPCR1Q3MIW9 517 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 KIAA0319Q5VV43 1072 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 TTI2Q6NXR4 508 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 TRAPPC11Q7Z392 1133 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 PLEKHO2Q8TD55 490 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 TMC2Q8TDI7 906 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 SUSD3Q96L08 255 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 MKNK1Q9BUB5 465 aa22.45■■□□□ 1.19
SMARCB1-202ENST00000344921 PNPLA4P41247 253 aa22.45■■□□□ 1.18
SMARCB1-202ENST00000344921 HYAL1Q12794 435 aa22.45■■□□□ 1.18
SMARCB1-202ENST00000344921 BIRC3Q13489 604 aa22.45■■□□□ 1.18
SMARCB1-202ENST00000344921 PRSS55Q6UWB4 352 aaPredicted RBP22.45■■□□□ 1.18
SMARCB1-202ENST00000344921 RBM43Q6ZSC3 357 aaKnown RBP22.45■■□□□ 1.18
SMARCB1-202ENST00000344921 CLSTN1O94985 981 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 FGFR3P22607 806 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 PAX3P23760 479 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 KLRC2P26717 231 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 AP3M2P53677 418 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 BFSP1Q12934 665 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 SV2CQ496J9 727 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 PDXDC1Q6P996 788 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 GLYCTKQ8IVS8 523 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 ZNF516Q92618 1163 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 DUSP9Q99956 384 aaKnown RBP22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 GZF1Q9H116 711 aaPredicted RBP22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 RWDD2AQ9UIY3 292 aa22.44■■□□□ 1.18
SMARCB1-202ENST00000344921 SYN3O14994 580 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 SLC16A3O15427 465 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 CNPP09543 421 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 MYO1EQ12965 1108 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 TRPC3Q13507 836 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 PSMD5Q16401 504 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 KLHL40Q2TBA0 621 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 APPL2Q8NEU8 664 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 SENP8Q96LD8 212 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 CEP63Q96MT8 703 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms