RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TCF7P36402 384 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 IFI35P80217 286 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 ZFYVE27Q5T4F4 411 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 LIN9Q5TKA1 542 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 LRRC71Q8N4P6 559 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 RAPGEF5Q92565 580 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 ART4Q93070 314 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 CCDC113Q9H0I3 377 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 LRRC19Q9H756 370 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 LCTP09848 1927 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 GMNCA6NCL1 334 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 KIAA0754O94854 1291 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 ACSL3O95573 720 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 MYBL1P10243 752 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 TAS2R40P59535 323 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 NOMO3P69849 1222 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 SF3A3Q12874 501 aaKnown RBP eCLIP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 ABRAQ8N0Z2 381 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 TLCD1Q96CP7 247 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 TRIM11Q96F44 468 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 DDX27Q96GQ7 796 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 FAM81BQ96LP2 452 aa15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 DDX23Q9BUQ8 820 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.86■□□□□ 0.13
VIPAS39-202ENST00000343765 CNTNAP2Q9UHC6 1331 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 RIPK2O43353 540 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 CST3P01034 146 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 ABCD1P33897 745 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 QPCTQ16769 361 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 CCDC38Q502W7 563 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 RNF187Q5TA31 235 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 LBX2Q6XYB7 198 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 TADA2BQ86TJ2 420 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 C12orf50Q8NA57 414 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 NIFKQ9BYG3 293 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 MTMR12Q9C0I1 747 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 NRBP2Q9NSY0 501 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 TRAPPC3O43617 180 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 ADCY3O60266 1144 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 PROSCO94903 275 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 LDHAP00338 332 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 PIGRP01833 764 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 GBP1P32455 592 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 MAMLD1Q13495 774 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 SPDYCQ5MJ68 293 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 SCARA5Q6ZMJ2 495 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 RUNDC3BQ96NL0 473 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 KCNG1Q9UIX4 513 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 LTBP3Q9NS15 1303 aa15.85■□□□□ 0.13
VIPAS39-202ENST00000343765 PGK2P07205 417 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 CHKAP35790 457 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 SLC1A1P43005 524 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 ENPEPQ07075 957 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 IFT88Q13099 833 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 NOL9Q5SY16 702 aaKnown RBP15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 PRUNE1Q86TP1 453 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 PPM1EQ8WY54 764 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 ZBTB10Q96DT7 871 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 PWWP2AQ96N64 755 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 IMPG2Q9BZV3 1241 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 ADGRA2Q96PE1 1338 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 A0A087WUV0 522 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 POTEJP0CG39 1038 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 OSTNP61366 133 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 CDR2LQ86X02 465 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 OTUD6BQ8N6M0 293 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 DCLK3Q9C098 648 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 SPATC1LQ9H0A9 340 aa15.84■□□□□ 0.13
VIPAS39-202ENST00000343765 IGKV6D-21A0A0A0MT36 114 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 PI4K2BG5E9Z4 385 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 GJB1P08034 283 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 RARGP13631 454 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 RFC5P40937 340 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 BYSLQ13895 437 aaKnown RBP15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 SLMAPQ14BN4 828 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 TARBP2Q15633 366 aaKnown RBP15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 FAM160B1Q5W0V3 765 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 KAZNQ674X7 775 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 ANKS1BQ7Z6G8 1248 aa15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 CDC42EP4Q9H3Q1 356 aaKnown RBP15.83■□□□□ 0.13
VIPAS39-202ENST00000343765 ADM5C9JUS6 153 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 ARIH2O95376 493 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 CHN1P15882 459 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 TCF4P15884 667 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 TBXAS1P24557 533 aaPredicted RBP15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 BRD2P25440 801 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 ADCY8P40145 1251 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 MYL6P60660 151 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 RPL7AP62424 266 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 LONRF1Q17RB8 773 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 ATP13A4Q4VNC1 1196 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 SH3D19Q5HYK7 790 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 RNF149Q8NC42 400 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
VIPAS39-202ENST00000343765 POLR2AP24928 1970 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms