RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF710Q8N1W2 664 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 EXT2Q93063 718 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 MAGEB18Q96M61 343 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 CARD14Q9BXL6 1004 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 XKR8Q9H6D3 395 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 CABP1Q9NZU7 370 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 DDX25Q9UHL0 483 aaKnown RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 PCDHGB4Q9UN71 923 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 PHF8Q9UPP1 1060 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 FGFR4P22455 802 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 KDM7AQ6ZMT4 941 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 C11orf57Q6ZUT1 292 aaPredicted RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 PROM2Q8N271 834 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 KCTD17Q8N5Z5 321 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 PJA1Q8NG27 643 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 NUDT12Q9BQG2 462 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 AVENQ9NQS1 362 aaPredicted RBP6.45□□□□□ -1.38
VCAN-203ENST00000343200 SNRKQ9NRH2 765 aa6.45□□□□□ -1.38
VCAN-203ENST00000343200 ATP8B3O60423 1300 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 MAGEB16A2A368 324 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CHP2O43745 196 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ECE2O60344 883 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 KRT34O76011 436 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 RFX1P22670 979 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CIITAP33076 1130 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 RCVRNP35243 200 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SLC25A24Q6NUK1 477 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CABP7Q86V35 215 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CCDC185Q8N715 623 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CCNYL1Q8N7R7 359 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 FNIP1Q8TF40 1166 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 HAVCR1Q96D42 359 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 AP1S3Q96PC3 154 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 RABL2BQ9UNT1 228 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SPEF1Q9Y4P9 236 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CNOT3O75175 753 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 XRCC4Q13426 336 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 KNOP1Q1ED39 458 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 BICRALQ6AI39 1079 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ANKRD26P1Q6NSI1 321 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 GET4Q7L5D6 327 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 GAS2L3Q86XJ1 694 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 DIS3L2Q8IYB7 885 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 FAM9CQ8IZT9 166 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ZNF274Q96GC6 653 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 RBBP8Q99708 897 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ZBTB24O43167 697 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 ATP9AO75110 1047 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 NOL4O94818 638 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 EPN2O95208 641 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PDHBP11177 359 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 DLG1Q12959 904 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SPDYE7PQ495Y7 208 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 LMBRD2Q68DH5 695 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 CCDC137Q6PK04 289 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 RNF19BQ6ZMZ0 732 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 BNIPLQ7Z465 357 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 IZUMO1Q8IYV9 350 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ZNF654Q8IZM8 581 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 KCNH5Q8NCM2 988 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CCNYQ8ND76 341 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 MEIS3Q99687 375 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 VTA1Q9NP79 307 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 DCAF8L1A6NGE4 600 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PPP6R2O75170 966 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ENO3P13929 434 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 SFNP31947 248 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ABATP80404 500 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SPICE1Q8N0Z3 855 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CNBD1Q8NA66 436 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 MOSPD2Q8NHP6 518 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 FOXP3Q9BZS1 431 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ZNF624Q9P2J8 865 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 ABCC5O15440 1437 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PHGDHO43175 533 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 HUS1O60921 280 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PSMA2P25787 234 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SLC9A3P48764 834 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 LIG4P49917 911 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 KPNA1P52294 538 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 ARF5P84085 180 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PARP10Q53GL7 1025 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CDC73Q6P1J9 531 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CRELD2Q6UXH1 353 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 PLGRKTQ9HBL7 147 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SH3BP4Q9P0V3 963 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ZNF180Q9UJW8 692 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PFASO15067 1338 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 MYO3BQ8WXR4 1341 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 A0A1W2PQ72 361 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 AIM2O14862 343 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SRGAP2O75044 1071 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 MYL2P10916 166 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 RPS2P15880 293 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 ZNF23P17027 643 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 GPTP24298 496 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CSE1LP55060 971 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 FOXD4Q12950 439 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms