RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ATF7P17544 494 aaPredicted RBP25.53■■□□□ 1.68
NELFB-201ENST00000343053 NCALDP61601 193 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 P3H1Q32P28 736 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 KIRREL3Q8IZU9 778 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 GIMAP7Q8NHV1 300 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 TMEM174Q8WUU8 243 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 GMLQ99445 158 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 MOV10L1Q9BXT6 1211 aaKnown RBP25.53■■□□□ 1.68
NELFB-201ENST00000343053 FHDC1Q9C0D6 1143 aaPredicted RBP25.53■■□□□ 1.68
NELFB-201ENST00000343053 KIF9Q9HAQ2 790 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 ANKFY1Q9P2R3 1169 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 KIAA1217Q5T5P2 1943 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 LIG4P49917 911 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 KRT76Q01546 638 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 MTM1Q13496 603 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 ATL2Q8NHH9 583 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 SLCO2A1Q92959 643 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 ATG4CQ96DT6 458 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 FBXL18Q96ME1 805 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 OSBPL8Q9BZF1 889 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 POLR3FQ9H1D9 316 aaPredicted RBP25.53■■□□□ 1.68
NELFB-201ENST00000343053 DEFB129Q9H1M3 183 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 A1CFQ9NQ94 594 aaKnown RBP25.53■■□□□ 1.68
NELFB-201ENST00000343053 ADAM22Q9P0K1 906 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 FZD1Q9UP38 647 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 PCDHB4Q9Y5E5 795 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 PCDHA10Q9Y5I2 948 aa25.53■■□□□ 1.68
NELFB-201ENST00000343053 OAS1P00973 400 aaKnown RBP25.52■■□□□ 1.68
NELFB-201ENST00000343053 MON1BQ7L1V2 547 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 SPOCK2Q92563 424 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 N4BP2L2Q92802 583 aaPredicted RBP25.52■■□□□ 1.68
NELFB-201ENST00000343053 TMEM143Q96AN5 459 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 CXorf56Q9H5V9 222 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 ANKEF1Q9NU02 776 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 IGF2BP3O00425 579 aaKnown RBP eCLIP25.52■■□□□ 1.68
NELFB-201ENST00000343053 PIAS1O75925 651 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 PROSCO94903 275 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 EGFRP00533 1210 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 GCNT1Q02742 428 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 FASTKD3Q14CZ7 662 aaKnown RBP25.52■■□□□ 1.68
NELFB-201ENST00000343053 SPATA21Q7Z572 469 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 CCDC60Q8IWA6 550 aaPredicted RBP25.52■■□□□ 1.68
NELFB-201ENST00000343053 APOBEC3GQ9HC16 384 aaKnown RBP25.52■■□□□ 1.68
NELFB-201ENST00000343053 PCDHB2Q9Y5E7 798 aa25.52■■□□□ 1.68
NELFB-201ENST00000343053 WDR46O15213 610 aaKnown RBP25.51■■□□□ 1.67
NELFB-201ENST00000343053 RPL7AP62424 266 aaKnown RBP25.51■■□□□ 1.67
NELFB-201ENST00000343053 WDR44Q5JSH3 913 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 CGB2Q6NT52 195 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 TAB3Q8N5C8 712 aaPredicted RBP25.51■■□□□ 1.67
NELFB-201ENST00000343053 GRK7Q8WTQ7 553 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 STAMBPL1Q96FJ0 436 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 MCM8Q9UJA3 840 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 WNT10BO00744 389 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 SNRPFP62306 86 aaKnown RBP25.51■■□□□ 1.67
NELFB-201ENST00000343053 KLF1Q13351 362 aaPredicted RBP25.51■■□□□ 1.67
NELFB-201ENST00000343053 TEX2Q8IWB9 1127 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 FITM2Q8N6M3 262 aa25.51■■□□□ 1.67
NELFB-201ENST00000343053 RPAP3Q9H6T3 665 aaPredicted RBP25.51■■□□□ 1.67
NELFB-201ENST00000343053 POC1B-GALNT4F8VUJ3 575 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 SUN1O94901 812 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 GNA15P30679 374 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 ALDH5A1P51649 535 aaPredicted RBP25.5■■□□□ 1.67
NELFB-201ENST00000343053 PRKCEQ02156 737 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 NEDD9Q14511 834 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 BRDTQ58F21 947 aaPredicted RBP25.5■■□□□ 1.67
NELFB-201ENST00000343053 TMEM63BQ5T3F8 832 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 CKAP2Q8WWK9 683 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 RBM15Q96T37 977 aaKnown RBP eCLIP25.5■■□□□ 1.67
NELFB-201ENST00000343053 RASA4BC9J798 803 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 TLR3O15455 904 aaKnown RBP25.5■■□□□ 1.67
NELFB-201ENST00000343053 RASA4O43374 803 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 BANF1O75531 89 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 ECM2O94769 699 aaPredicted RBP25.5■■□□□ 1.67
NELFB-201ENST00000343053 SFNP31947 248 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 FAM182AQ5T1J6 154 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 MIS18BP1Q6P0N0 1132 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 USP37Q86T82 979 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 TIPINQ9BVW5 301 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 HAPLN2Q9GZV7 340 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 SAYSD1Q9NPB0 183 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 RNF146Q9NTX7 359 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 VNN1O95497 513 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 MGAT5Q09328 741 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 MAMLD1Q13495 774 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 ZNF394Q53GI3 561 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 SUPT20HQ8NEM7 779 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 DNPEPQ9ULA0 475 aa25.5■■□□□ 1.67
NELFB-201ENST00000343053 ZNF541Q9H0D2 1346 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 GSTA1P08263 222 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 EZRP15311 586 aaKnown RBP25.49■■□□□ 1.67
NELFB-201ENST00000343053 FOXN2P32314 431 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 CENPCQ03188 943 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 PDGFDQ9GZP0 370 aaPredicted RBP25.49■■□□□ 1.67
NELFB-201ENST00000343053 GEMIN8Q9NWZ8 242 aaKnown RBP25.49■■□□□ 1.67
NELFB-201ENST00000343053 NR3C2P08235 984 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 KRT16P08779 473 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 ATP5DP30049 168 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 WLSQ5T9L3 541 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 RHOT1Q8IXI2 618 aa25.49■■□□□ 1.67
NELFB-201ENST00000343053 KLHL29Q96CT2 875 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms