RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 DCLRE1AQ6PJP8 1040 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 FRMD5Q7Z6J6 570 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 WDR49Q8IV35 697 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 RNF168Q8IYW5 571 aaPredicted RBP23.73■■□□□ 1.39
RBM38-201ENST00000342690 PLEKHO2Q8TD55 490 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 CACTINQ8WUQ7 758 aaKnown RBP23.73■■□□□ 1.39
RBM38-201ENST00000342690 LMCD1Q9NZU5 365 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 MAGEC2Q9UBF1 373 aaPredicted RBP23.73■■□□□ 1.39
RBM38-201ENST00000342690 PTPRJQ12913 1337 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 CDH23Q9H251 3354 aa23.73■■□□□ 1.39
RBM38-201ENST00000342690 BECN2A8MW95 431 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 IKBKBO14920 756 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 FSCN2O14926 492 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 TADA2AO75478 443 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 B3GAT3O94766 335 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 TMEM191BP0C7N4 346 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 TNNI1P19237 187 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 ERVFC1P60507 584 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 VPS52Q8N1B4 723 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 PARD3BQ8TEW8 1205 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 ANKRD36BP1Q96IX9 119 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 CNOT6LQ96LI5 555 aaKnown RBP23.72■■□□□ 1.39
RBM38-201ENST00000342690 HERC2P3Q9BVR0 1158 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 GPR62Q9BZJ7 368 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 ZBP1Q9H171 429 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 PCDHGC5Q9Y5F6 944 aa23.72■■□□□ 1.39
RBM38-201ENST00000342690 PPEF2O14830 753 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 CREBRFQ8IUR6 639 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 OR5B17Q8NGF7 314 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 TCF25Q9BQ70 676 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 MTMR12Q9C0I1 747 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 INTS13Q9NVM9 706 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 DPP3Q9NY33 737 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 TRANK1O15050 2925 aa23.71■■□□□ 1.39
RBM38-201ENST00000342690 SF3B1O75533 1304 aaKnown RBP eCLIP23.7■■□□□ 1.387e-7■■■■■ 104
RBM38-201ENST00000342690 LRRIQ3A6PVS8 624 aaPredicted RBP23.7■■□□□ 1.38
RBM38-201ENST00000342690 STX10O60499 249 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 TNNC2P02585 160 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 SOD2P04179 222 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 AP3M2P53677 418 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 DCAF17Q5H9S7 520 aaPredicted RBP23.7■■□□□ 1.38
RBM38-201ENST00000342690 TCERG1LQ5VWI1 586 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 PLPP4Q5VZY2 271 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 TAS1R1Q7RTX1 841 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 C1orf127Q8N9H9 656 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 BORCS6Q96GS4 357 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 POP1Q99575 1024 aaKnown RBP23.7■■□□□ 1.38
RBM38-201ENST00000342690 ENTPD7Q9NQZ7 604 aa23.7■■□□□ 1.38
RBM38-201ENST00000342690 ANO9A1A5B4 782 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 BRCC3P46736 316 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 MARSP56192 900 aaKnown RBP23.69■■□□□ 1.38
RBM38-201ENST00000342690 TPM4P67936 248 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 DUOXA2Q1HG44 320 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 C9orf57Q5W0N0 161 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 TMC7Q7Z402 723 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 FAM200AQ8TCP9 573 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 CBX8Q9HC52 389 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 SAMSN1Q9NSI8 373 aaKnown RBP23.69■■□□□ 1.38
RBM38-201ENST00000342690 STK39Q9UEW8 545 aa23.69■■□□□ 1.38
RBM38-201ENST00000342690 PIRO00625 290 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 TRIM49P0CI25 452 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 TRIM49CP0CI26 452 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 CTSAP10619 480 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 MTIF2P46199 727 aaKnown RBP23.68■■□□□ 1.38
RBM38-201ENST00000342690 DLG4P78352 724 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 CLDN10P78369 228 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 TIGD5Q53EQ6 642 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 SCARA3Q6AZY7 606 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 DHX40Q8IX18 779 aaKnown RBP23.68■■□□□ 1.38
RBM38-201ENST00000342690 MICALL1Q8N3F8 863 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 MICAL1Q8TDZ2 1067 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 AUTS2Q8WXX7 1259 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 ZNF516Q92618 1163 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 FANCLQ9NW38 375 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 R3HCC1Q9Y3T6 440 aaKnown RBP23.68■■□□□ 1.38
RBM38-201ENST00000342690 NUB1Q9Y5A7 615 aa23.68■■□□□ 1.38
RBM38-201ENST00000342690 VWA8A3KMH1 1905 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 KCNJ18B7U540 433 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 I3L4J1 428 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 ITGB3P05106 788 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 ELAVL2Q12926 359 aaKnown RBP23.67■■□□□ 1.38
RBM38-201ENST00000342690 KCNJ12Q14500 433 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 SMC1AQ14683 1233 aaKnown RBP23.67■■□□□ 1.38
RBM38-201ENST00000342690 NCAPHQ15003 741 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 HSP90AA4PQ58FG1 418 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 PDE12Q6L8Q7 609 aaKnown RBP23.67■■□□□ 1.38
RBM38-201ENST00000342690 ADGRD2Q7Z7M1 963 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 IRF2BP1Q8IU81 584 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 TRIM59Q8IWR1 403 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 ANKRD20A12PQ8NF67 263 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 CXorf38Q8TB03 319 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 B3GALT6Q96L58 329 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 NSUN3Q9H649 340 aaKnown RBP23.67■■□□□ 1.38
RBM38-201ENST00000342690 NGRNQ9NPE2 291 aaKnown RBP23.67■■□□□ 1.38
RBM38-201ENST00000342690 SIX4Q9UIU6 781 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 ITGA11Q9UKX5 1188 aa23.67■■□□□ 1.38
RBM38-201ENST00000342690 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.67■■□□□ 1.38
RBM38-201ENST00000342690 SCN1AP35498 2009 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 GOLGA6L19H0YKK7 550 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 PHACTR2O75167 634 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms