RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CLGNO14967 610 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 BRD2P25440 801 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 KRT76Q01546 638 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 FAM102AQ5T9C2 384 aaPredicted RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 SERPINB12Q96P63 405 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 OLFML3Q9NRN5 406 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 AKT3Q9Y243 479 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 MYH2Q9UKX2 1941 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 PPFIA2O75334 1257 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 GH1P01241 217 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 KRT3P12035 628 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 GYS1P13807 737 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 GTF2H1P32780 548 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 JAK3P52333 1124 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 GADL1Q6ZQY3 521 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 MREGQ8N565 214 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 C1orf131Q8NDD1 294 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 VPS11Q9H270 941 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 SLCO1B3Q9NPD5 702 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 RAB6BQ9NRW1 208 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 CAPN9O14815 690 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 KRT34O76011 436 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 PLCB4Q15147 1175 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 ZNF667Q5HYK9 610 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 FAM182AQ5T1J6 154 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 TMCO4Q5TGY1 634 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 MTDHQ86UE4 582 aaKnown RBP13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 CRLF3Q8IUI8 442 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 TTC25Q96NG3 672 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 THTPAQ9BU02 230 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 TSSK1BQ9BXA7 367 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 TMEM8AQ9HCN3 771 aa13.12□□□□□ -0.31
SNRNP48-201ENST00000342415 CHKAP35790 457 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 FNTAP49354 379 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 BIRC2Q13490 618 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 NCOA4Q13772 614 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 CD302Q8IX05 232 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 FAM71DQ8N9W8 422 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 SLC26A7Q8TE54 656 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 FAM111AQ96PZ2 611 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 SENP7Q9BQF6 1050 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 ETS1P14921 441 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 PRKCIP41743 596 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 NPTX2P47972 431 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 RGS7P49802 495 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 MIPOL1Q8TD10 442 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 GRAMD1AQ96CP6 724 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 ACAP3Q96P50 834 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 RPS6KC1Q96S38 1066 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 KIF9Q9HAQ2 790 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 KCNMB3Q9NPA1 279 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 LRRC4BQ9NT99 713 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 ATP5HO75947 161 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 UBTFL6P0CB48 400 aaPredicted RBP13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 RBP3P10745 1247 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 SLC8A3P57103 927 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 EXOC3L1Q86VI1 746 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 ZBTB10Q96DT7 871 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
SNRNP48-201ENST00000342415 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 A8MUI8 341 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 B2RBV5 119 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 H3BRJ5 948 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 P4HA1P13674 534 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 SSTR1P30872 391 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 NR1H3Q13133 447 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 MTMR2Q13614 643 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 EMC1Q8N766 993 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 MCUQ8NE86 351 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 SPECC1L-ADORA2AF8WAN1 911 aa13.1□□□□□ -0.31
SNRNP48-201ENST00000342415 M0QYV0 167 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms