RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 AJAP1Q9UKB5 411 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-201ENST00000342245 GRID1Q9ULK0 1009 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 BAZ2AQ9UIF9 1905 aaKnown RBP19.59■□□□□ 0.73
SMPD1-201ENST00000342245 SMCO2A6NFE2 343 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 SMIM22K7EJ46 135 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 CBFA2T3O75081 653 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 BAG2O95816 211 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 KRT15P19012 456 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 UBE4AQ14139 1066 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 ANKRD20A4Q4UJ75 823 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 PDCD4Q53EL6 469 aaKnown RBP19.58■□□□□ 0.73
SMPD1-201ENST00000342245 SGO2Q562F6 1265 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 PLEKHG4Q58EX7 1191 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 HYIQ5T013 277 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 KYAT3Q6YP21 454 aaKnown RBP19.58■□□□□ 0.73
SMPD1-201ENST00000342245 ADGRA1Q86SQ6 560 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 SLC15A3Q8IY34 581 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 FAM172AQ8WUF8 416 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 CD101Q93033 1021 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 ABHD8Q96I13 439 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 USP29Q9HBJ7 922 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 TRPV5Q9NQA5 729 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 INIPQ9NRY2 104 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.73
SMPD1-201ENST00000342245 USP17L12C9JPN9 530 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 USP17L21D6R901 530 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 PDXKO00764 312 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 FSCN2O14926 492 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 TYROBPO43914 113 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 IL2RBP14784 551 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 VCLP18206 1134 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 GALK1P51570 392 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 GPC5P78333 572 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 PDK3Q15120 406 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 SEPT7Q16181 437 aaKnown RBP19.58■□□□□ 0.72
SMPD1-201ENST00000342245 DCAF17Q5H9S7 520 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-201ENST00000342245 FAM47AQ5JRC9 791 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 GRAMD4Q6IC98 578 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 KLHDC10Q6PID8 442 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 KIAA1586Q9HCI6 787 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 TUBA8Q9NY65 449 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-201ENST00000342245 KANSL3Q9P2N6 904 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 TELO2Q9Y4R8 837 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 A0A1B0GUL6 1792 aa19.58■□□□□ 0.72
SMPD1-201ENST00000342245 GSTTP1A0A1W2PQM5 241 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 E9PBE3 544 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 CSDE1O75534 798 aaKnown RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 COMTP21964 271 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 VPS41P49754 854 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 NKX1-1Q15270 411 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 KCNK18Q7Z418 384 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 BBS5Q8N3I7 341 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 VTI1AQ96AJ9 217 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 DNAJC1Q96KC8 554 aaKnown RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 FAM81BQ96LP2 452 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 VPS11Q9H270 941 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 BHMT2Q9H2M3 363 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 DCTN4Q9UJW0 460 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 KANSL1LA0AUZ9 987 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 CHRNB2P17787 502 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 GEMIN4P57678 1058 aaKnown RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 SLC1A5Q15758 541 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 LVRNQ6Q4G3 990 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 DHDDSQ86SQ9 333 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 DQX1Q8TE96 717 aaKnown RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 TTC1Q99614 292 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 MRPS26Q9BYN8 205 aaKnown RBP19.57■□□□□ 0.72
SMPD1-201ENST00000342245 ARHGEF38Q9NXL2 777 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 TBC1D7Q9P0N9 293 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 SLC24A2Q9UI40 661 aa19.57■□□□□ 0.72
SMPD1-201ENST00000342245 KAT6BQ8WYB5 2073 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 COL5A2P05997 1499 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 ESYT2A0FGR8 921 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 TM9SF1O15321 606 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 CLPTM1O96005 669 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 RFX1P22670 979 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 ADCY8P40145 1251 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 MARCKSL1P49006 195 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 TBL3Q12788 808 aaKnown RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 KNOP1Q1ED39 458 aaKnown RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 MMEL1Q495T6 779 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 RFWD2Q8NHY2 731 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 DDI1Q8WTU0 396 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 SLC35C1Q96A29 364 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 ARPP21Q9UBL0 812 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 POLIQ9UNA4 740 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 R3HDM2Q9Y2K5 976 aaKnown RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 A0A0G2JND7 137 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 PDE5AO76074 875 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 OR6B1O95007 311 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 IL1BP01584 269 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 KIF22Q14807 665 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 DRAP1Q14919 205 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 TBCCQ15814 346 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 SBK1Q52WX2 424 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 UGT2A3Q6UWM9 527 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 ANKS1BQ7Z6G8 1248 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms