RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 LIG1P18858 919 aa18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 STK3Q13188 491 aa18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 WDR5BQ86VZ2 330 aa18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 ZMIZ1Q9ULJ6 1067 aa18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 NUP210Q8TEM1 1887 aaPredicted RBP18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 CITO14578 2027 aa18.03■□□□□ 0.48
NECTIN1-202ENST00000340882 WNT7AO00755 349 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 FOXD2O60548 495 aaPredicted RBP18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 PXNP49023 591 aaPredicted RBP18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 LRRC32Q14392 662 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 TMEM132AQ24JP5 1023 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 CYP4A22Q5TCH4 519 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 PKN3Q6P5Z2 889 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 KBTBD6Q86V97 674 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 ZBTB8OSQ8IWT0 167 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 SLFN12Q8IYM2 578 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 C12orf50Q8NA57 414 aaPredicted RBP18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 SHKBP1Q8TBC3 707 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 LRRC3BQ96PB8 259 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 LSM14BQ9BX40 385 aaKnown RBP18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 FBXL5Q9UKA1 691 aa18.02■□□□□ 0.48
NECTIN1-202ENST00000340882 SMIM28A0A1B0GU29 152 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 ACKR2O00590 384 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 CPLX1O14810 134 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 EXTL3O43909 919 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 RAP1GAPP47736 663 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 EPHA5P54756 1037 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 MLLT6P55198 1093 aaPredicted RBP18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 TWF1Q12792 350 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 MRPL58Q14197 206 aaKnown RBP18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 NT5DC1Q5TFE4 455 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 FAM177A1Q8N128 213 aaPredicted RBP18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 CEP120Q8N960 986 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 CSGALNACT1Q8TDX6 532 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 ZFYVE19Q96K21 471 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 CCDC43Q96MW1 224 aaKnown RBP18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 KIFC3Q9BVG8 833 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 POLD4Q9HCU8 107 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 PCDHA12Q9UN75 941 aa18.01■□□□□ 0.47
NECTIN1-202ENST00000340882 MYBPHLA2RUH7 354 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 SPECC1L-ADORA2AF8WAN1 911 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 GIPC1O14908 333 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 TRAPPC3O43617 180 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 CDC45O75419 566 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 EPN2O95208 641 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 SPATA31C1P0DKV0 1188 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 HOXA6P31267 233 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 CTHP32929 405 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 KPNA1P52294 538 aaPredicted RBP18■□□□□ 0.47
NECTIN1-202ENST00000340882 PON2Q15165 354 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 PLA2G2CQ5R387 149 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 STXBP5Q5T5C0 1151 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 TCEAL6Q6IPX3 200 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 PSAPL1Q6NUJ1 521 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 UNQ6494/PRO21346Q6UXR6 183 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 TCEAL3Q969E4 200 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 ZNF512Q96ME7 567 aaPredicted RBP18■□□□□ 0.47
NECTIN1-202ENST00000340882 UROC1Q96N76 676 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 ZMAT2Q96NC0 199 aaKnown RBP18■□□□□ 0.47
NECTIN1-202ENST00000340882 ADPGKQ9BRR6 497 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 LRRC3Q9BY71 257 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
NECTIN1-202ENST00000340882 GTSE1Q9NYZ3 720 aa18■□□□□ 0.47
NECTIN1-202ENST00000340882 CHADO15335 359 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 VNN2O95498 520 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 TOP3BO95985 862 aaKnown RBP17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 SPINK2P20155 84 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 FCHO2Q0JRZ9 810 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 NR5A1Q13285 461 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 CCINQ13939 588 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 MAPK6Q16659 721 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 IQCEQ6IPM2 695 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 RNF19BQ6ZMZ0 732 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 TMEM130Q8N3G9 435 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 GAB3Q8WWW8 586 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 TMEM121BQ9BXQ6 578 aaPredicted RBP17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 C8orf33Q9H7E9 229 aaPredicted RBP17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 POLR3BQ9NW08 1133 aaPredicted RBP17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 WASF3Q9UPY6 502 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 NUP205Q92621 2012 aa17.99■□□□□ 0.47
NECTIN1-202ENST00000340882 ANKRD11Q6UB99 2663 aaPredicted RBP17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 PODXLO00592 558 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 DCAF4L1Q3SXM0 396 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 CTXN3Q4LDR2 81 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 DGKKQ5KSL6 1271 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 TPGS2Q68CL5 300 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 ALKAL1Q6UXT8 129 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 TMC8Q8IU68 726 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 YAF2Q8IY57 180 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 NAP1L4Q99733 375 aaKnown RBP17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 MKNK1Q9BUB5 465 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 C2orf40Q9H1Z8 148 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 SLITRK6Q9H5Y7 841 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 ASAH2Q9NR71 780 aa17.98■□□□□ 0.47
NECTIN1-202ENST00000340882 NBEAQ8NFP9 2946 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms