RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 RARRES1P49788 294 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 NFIL3Q16649 462 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ANKRD20A2Q5SQ80 823 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ANKRD20A1Q5TYW2 823 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ANKRD20A3Q5VUR7 823 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ARMC3Q5W041 872 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ASRGL1Q7L266 308 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 RUNDC3BQ96NL0 473 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 SERPINB12Q96P63 405 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 TEKT3Q9BXF9 490 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 PITPNM3Q9BZ71 974 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 DCLK3Q9C098 648 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ALG13Q9NP73 1137 aaKnown RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 FSCN2O14926 492 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 MAP3K13O43283 966 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ALADP13716 330 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 SP4Q02446 784 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 CETN1Q12798 172 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 IZUMO3Q5VZ72 239 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 STXBP4Q6ZWJ1 553 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 GMCL1P1Q8NEA9 526 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 ZBTB10Q96DT7 871 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 KLF6Q99612 283 aaPredicted RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 SLC5A4Q9NY91 659 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 CPSF2Q9P2I0 782 aaKnown RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 LARSQ9P2J5 1176 aaKnown RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 SEL1LQ9UBV2 794 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 CHKBQ9Y259 395 aa12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.71□□□□□ -0.37
CCDC144CP-201ENST00000340196 SLC26A4O43511 780 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 GCAP28676 217 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 CDR2Q01850 454 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 EFTUD2Q15029 972 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 PKN2Q16513 984 aaKnown RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 P3H1Q32P28 736 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 MIS18BP1Q6P0N0 1132 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 TTC8Q8TAM2 541 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 A0A1W2PPM1 405 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 ENO4A6NNW6 628 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 FDX1P10109 184 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 EPHB2P29323 1055 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 RIPK1Q13546 671 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 CRELD2Q6UXH1 353 aaPredicted RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 GSTA5Q7RTV2 222 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 SLC9A9Q8IVB4 645 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 C12orf50Q8NA57 414 aaPredicted RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 BSNDQ8WZ55 320 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 KIAA1683Q9H0B3 1180 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 WHRNQ9P202 907 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 KLHL14Q9P2G3 628 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 RBBP6Q7Z6E9 1792 aaKnown RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 ATP9AO75110 1047 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 RPA3P35244 121 aaPredicted RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 OVGP1Q12889 678 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 SYCP2LQ5T4T6 812 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 RBM15Q96T37 977 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 ROPN1BQ9BZX4 212 aaPredicted RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 ROPN1Q9HAT0 212 aaPredicted RBP12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 SAYSD1Q9NPB0 183 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 NKIRAS1Q9NYS0 192 aa12.7□□□□□ -0.38
CCDC144CP-201ENST00000340196 COL4A5P29400 1685 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 GOLGA8RI6L899 631 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 ENTPD5O75356 428 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 GGPS1O95749 300 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 PDHA1P08559 390 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 GZMAP12544 262 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 YY1P25490 414 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 TUBP50607 506 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 SESN3P58005 492 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 MTFR1Q15390 333 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 SLC1A5Q15758 541 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 SLC39A4Q6P5W5 647 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 LDHDQ86WU2 507 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 ANKMY2Q8IV38 441 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 SAE1Q9UBE0 346 aaPredicted RBP12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 MTA2O94776 668 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 UNC5CO95185 931 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 PLS3P13797 630 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 EIF2AK2P19525 551 aaKnown RBP12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 ITIH2P19823 946 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 DSG3P32926 999 aa12.69□□□□□ -0.38
CCDC144CP-201ENST00000340196 MFAP3P55082 362 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms