RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ATP2A2P16615 1042 aaKnown RBP15.88■□□□□ 0.13
CSRP1-201ENST00000340006 OR1G1P47890 313 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 CLCNKBP51801 687 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 TUSC3Q13454 348 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 EPC2Q52LR7 807 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 C9orf57Q5W0N0 161 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 CPLX3Q8WVH0 158 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 HPDLQ96IR7 371 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
CSRP1-201ENST00000340006 CACNG4Q9UBN1 327 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 SIX4Q9UIU6 781 aa15.88■□□□□ 0.13
CSRP1-201ENST00000340006 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.88■□□□□ 0.13
CSRP1-201ENST00000340006 INPPL1O15357 1258 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 TRIM21P19474 475 aaKnown RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 BTG3Q14201 252 aaPredicted RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 SHHQ15465 462 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 NAB2Q15742 525 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 TRIM65Q6PJ69 517 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 CCDC186Q7Z3E2 898 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 PHOSPHO2Q8TCD6 241 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 DDX27Q96GQ7 796 aaKnown RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 IMPACTQ9P2X3 320 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 ZC3H11AO75152 810 aaKnown RBP eCLIP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 GJB5O95377 273 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 ZNF699Q32M78 642 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 WDR72Q3MJ13 1102 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 HS1BP3Q53T59 392 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 C9orf50Q5SZB4 431 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 SLC9A7Q96T83 725 aa15.87■□□□□ 0.13
CSRP1-201ENST00000340006 UBE2TQ9NPD8 197 aaPredicted RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 NXF1Q9UBU9 619 aaKnown RBP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.87■□□□□ 0.13
CSRP1-201ENST00000340006 PODXLO00592 558 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 PIRO00625 290 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 B3GAT3O94766 335 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 ATICP31939 592 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 PBX1P40424 430 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 RGS19P49795 217 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 APBA1Q02410 837 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 SPOPLQ6IQ16 392 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 RRAGAQ7L523 313 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 PPFIBP1Q86W92 1011 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 HERC6Q8IVU3 1022 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 LRRC43Q8N309 656 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 PPM1KQ8N3J5 372 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 LMO3Q8TAP4 145 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 TATDN2Q93075 761 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 ZNF689Q96CS4 500 aaPredicted RBP15.86■□□□□ 0.13
CSRP1-201ENST00000340006 UROC1Q96N76 676 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 NT5C1BQ96P26 610 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 PAAF1Q9BRP4 392 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 NUP58Q9BVL2 599 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 NRDE2Q9H7Z3 1164 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 DNAJB4Q9UDY4 337 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 SIK3Q9Y2K2 1263 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 INSL6Q9Y581 213 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 NUB1Q9Y5A7 615 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 SCN1AP35498 2009 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 ANO9A1A5B4 782 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 PPEF2O14830 753 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 TLL1O43897 1013 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 LRPAP1P30533 357 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 ALDH7A1P49419 539 aaKnown RBP15.86■□□□□ 0.13
CSRP1-201ENST00000340006 UPP1Q16831 310 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 ZNF667Q5HYK9 610 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 COLGALT2Q8IYK4 626 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 TAF4BQ92750 862 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 MMS19Q96T76 1030 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 FAN1Q9Y2M0 1017 aa15.86■□□□□ 0.13
CSRP1-201ENST00000340006 TPM1P09493 284 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 P4HA1P13674 534 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 PNPLA4P41247 253 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 TAF6P49848 677 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 POLR2FP61218 127 aaKnown RBP15.85■□□□□ 0.13
CSRP1-201ENST00000340006 NOP14P78316 857 aaKnown RBP15.85■□□□□ 0.13
CSRP1-201ENST00000340006 KLHDC7AQ5VTJ3 777 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 PHLDB3Q6NSJ2 640 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 DCLRE1AQ6PJP8 1040 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 CXorf38Q8TB03 319 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 ZNF560Q96MR9 790 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 RAD9AQ99638 391 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 PLCB1Q9NQ66 1216 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 PTPRSQ13332 1948 aa15.85■□□□□ 0.13
CSRP1-201ENST00000340006 KPNA7A9QM74 516 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 TADA2AO75478 443 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 ASS1P00966 412 aaKnown RBP15.84■□□□□ 0.13
CSRP1-201ENST00000340006 GSDMDP57764 484 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 LILRA4P59901 499 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 TNNC1P63316 161 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 DSC1Q08554 894 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 SV2CQ496J9 727 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 GJB7Q6PEY0 223 aa15.84■□□□□ 0.13
CSRP1-201ENST00000340006 LRRC52Q8N7C0 313 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms