RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 SYT2Q8N9I0 419 aaPredicted RBP9.96□□□□□ -0.82
NECAP1-201ENST00000339754 SMC1BQ8NDV3 1235 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 LMO3Q8TAP4 145 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 PPP2R3CQ969Q6 453 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 SKA1Q96BD8 255 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 SMC6Q96SB8 1091 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 DCLK3Q9C098 648 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 TMEM165Q9HC07 324 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 ARHGEF4Q9NR80 690 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 LRRC4BQ9NT99 713 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 CIDEBQ9UHD4 219 aa9.96□□□□□ -0.82
NECAP1-201ENST00000339754 MYO3BQ8WXR4 1341 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 EXOC1LA0A1B0GW35 172 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 SLC26A4O43511 780 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 TROVE2P10155 538 aaKnown RBP eCLIP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 PGM1P36871 562 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 VPS41P49754 854 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 SH3BGRP55822 239 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 DEUP1Q05D60 604 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 TMEM62Q0P6H9 643 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 CDC16Q13042 620 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 PABPC4Q13310 644 aaKnown RBP eCLIP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 ANKS1BQ7Z6G8 1248 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 ST13P4Q8IZP2 240 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 LZICQ8WZA0 190 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 LENG1Q96BZ8 264 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 TTC25Q96NG3 672 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 MAK16Q9BXY0 300 aaKnown RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 MINPP1Q9UNW1 487 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 ZNF232Q9UNY5 417 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 R3HDM2Q9Y2K5 976 aaKnown RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 MAST2Q6P0Q8 1798 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 A0A0G2JND7 137 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 POC1B-GALNT4F8VUJ3 575 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 MEIS1O00470 390 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 BUD23O43709 281 aaKnown RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 ATP9BO43861 1147 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 MAGEC1O60732 1142 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 PFDN1O60925 122 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 ESRRAP11474 423 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 KRT15P19012 456 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 POLD1P28340 1107 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 SERPINB3P29508 390 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 PIK3CAP42336 1068 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 GRM2Q14416 872 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 CEP128Q6ZU80 1094 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 RBM15Q96T37 977 aaKnown RBP eCLIP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 NUP85Q9BW27 656 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 EBF3Q9H4W6 596 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 FBXO6Q9NRD1 293 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-201ENST00000339754 RHBDL2Q9NX52 303 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 SENP1Q9P0U3 644 aa9.95□□□□□ -0.82
NECAP1-201ENST00000339754 OR6B1O95007 311 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 GCNT3O95395 438 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 NTSR2O95665 410 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 GAS8O95995 478 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 CYP1A2P05177 515 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 TRIM49P0CI25 452 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 TRIM49CP0CI26 452 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 SPATA31C1P0DKV0 1188 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 DESP17661 470 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ADSSP30520 456 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 CCDC142Q17RM4 750 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ACAD11Q709F0 780 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ANKRD23Q86SG2 305 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 PHLDB2Q86SQ0 1253 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 LARGE2Q8N3Y3 721 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 NME8Q8N427 588 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ZNF564Q8TBZ8 553 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 GRK7Q8WTQ7 553 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 SLC5A5Q92911 643 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 MPP4Q96JB8 637 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 AGBL1Q96MI9 1066 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 CFAP57Q96MR6 1250 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 DNAJB4Q9UDY4 337 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ARFGEF1Q9Y6D6 1849 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 FRMPD2Q68DX3 1309 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 GSTTP1A0A1W2PQM5 241 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 WDR91A4D1P6 747 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 PPP1R11O60927 126 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 TMCC1O94876 653 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ADRA1DP25100 572 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 MAN1A1P33908 653 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ARFIP2P53365 341 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 CDK16Q00536 496 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 MAP7Q14244 749 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 NFIL3Q16649 462 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 SH2D4BQ5SQS7 431 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 IZUMO3Q5VZ72 239 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 TRIM42Q8IWZ5 723 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms