RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TFAP2BQ92481 460 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 TAF4BQ92750 862 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 OSMRQ99650 979 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 C2orf40Q9H1Z8 148 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 TNFSF13BQ9Y275 285 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 NOC2LQ9Y3T9 749 aaKnown RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 PCDHB2Q9Y5E7 798 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 SIP14410 1827 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 A6NJR5 290 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 FAM155AB1AL88 458 aaPredicted RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 KIAA0391O15091 583 aaKnown RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 TREHO43280 583 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 RAD51CO43502 376 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 TSPAN1O60635 241 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 ZC3H11AO75152 810 aaKnown RBP eCLIP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 FGGP02679 453 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 SMIM10L2AP0DMW4 78 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 SMIM10L2BP0DMW5 78 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 BRD2P25440 801 aaKnown RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 GNA15P30679 374 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 HOXA11P31270 313 aaPredicted RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 ABCD1P33897 745 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 CARSP49589 748 aaKnown RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 TRIM32Q13049 653 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 WDR72Q3MJ13 1102 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 ACAD10Q6JQN1 1059 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 DDX42Q86XP3 938 aaKnown RBP eCLIP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 ZNF564Q8TBZ8 553 aaPredicted RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 DNAJB3Q8WWF6 145 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 ZNF606Q8WXB4 792 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 CELF4Q9BZC1 486 aaKnown RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 ERVK-5Q9HDB9 667 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 CISHQ9NSE2 258 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 CNOT8Q9UFF9 292 aaKnown RBP7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 HMGXB4Q9UGU5 601 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 TMEM59LQ9UK28 342 aa7.92□□□□□ -1.14
SRFBP1-201ENST00000339397 H3BQF6 201 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 MAP2K7O14733 419 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 THAP12O43422 761 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 ITGB3P05106 788 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 FAM153BP0C7A2 387 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TMEM191BP0C7N4 346 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 HOXD8P13378 290 aaPredicted RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 PHKA2P46019 1235 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 IFI16Q16666 785 aaKnown RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 FAM153CQ494X1 144 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 MCOLN2Q8IZK6 566 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TRPV1Q8NER1 839 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 CXorf38Q8TB03 319 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 HNRNPLLQ8WVV9 542 aaKnown RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 USP6NLQ92738 828 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 RPGRIP1Q96KN7 1286 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 JPH2Q9BR39 696 aaPredicted RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 C11orf70Q9BRQ4 267 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 EIF2AQ9BY44 585 aaKnown RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 SDCBP2Q9H190 292 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 RPF1Q9H9Y2 349 aaKnown RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 EPB41L5Q9HCM4 733 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 AMACRQ9UHK6 382 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 FAM153AQ9UHL3 310 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TSKSQ9UJT2 592 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 GABRQQ9UN88 632 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 PPME1Q9Y570 386 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TRIP11Q15643 1979 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 POLR3GO15318 223 aaPredicted RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 MAGEB2O15479 319 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 ASAP2O43150 1006 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 GPR32O75388 356 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 CYP1A2P05177 515 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 PYGMP11217 842 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 SCP2P22307 547 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TMOD1P28289 359 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 ASPAP45381 313 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 GUCY2DQ02846 1103 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TRPC3Q13507 836 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 CASP8Q14790 479 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 C8orf74Q6P047 294 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 ENOSF1Q7L5Y1 443 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 IFT81Q8WYA0 676 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 RIN2Q8WYP3 895 aaPredicted RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 ZMAT2Q96NC0 199 aaKnown RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 TWNKQ96RR1 684 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 ADAMTS10Q9H324 1103 aa7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 PRMT7Q9NVM4 692 aaPredicted RBP7.91□□□□□ -1.14
SRFBP1-201ENST00000339397 MROH7Q68CQ1 1323 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 KRIT1O00522 736 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 TNPO2O14787 897 aaKnown RBP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 PPEF2O14830 753 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 SART1O43290 800 aaKnown RBP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 B4GALT4O60513 344 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 HEXIM1O94992 359 aaKnown RBP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 CYP1A1P04798 512 aaPredicted RBP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 MYL3P08590 195 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 PEX5P50542 639 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 RPL7AP62424 266 aaKnown RBP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 ZNF699Q32M78 642 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 GLRA4Q5JXX5 417 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 MMS22LQ6ZRQ5 1243 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms