RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 XYLT2Q9H1B5 865 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 NXF1Q9UBU9 619 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 TMEM110-MUSTN1A8MSY1 372 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 HAS3O00219 553 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 FLT3LGP49771 235 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 FCGRTP55899 365 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 TRIM32Q13049 653 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 ACAD10Q6JQN1 1059 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 RHOT2Q8IXI1 618 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 C1orf127Q8N9H9 656 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 CYFIP2Q96F07 1278 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 GCOM2Q9BZD3 368 aaPredicted RBP24■■□□□ 1.43
PDLIM2-203ENST00000339162 SIX4Q9UIU6 781 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 ANK1P16157 1881 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 GUCY2FP51841 1108 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 VSNL1P62760 191 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 TUBB4BP68371 445 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 LACTBP83111 547 aaPredicted RBP24■■□□□ 1.43
PDLIM2-203ENST00000339162 CATSPER4Q7RTX7 472 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 BTBD6Q96KE9 485 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 NIF3L1Q9GZT8 377 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 CXCL16Q9H2A7 254 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 RBM12Q9NTZ6 932 aaKnown RBP24■■□□□ 1.43
PDLIM2-203ENST00000339162 AMFRQ9UKV5 643 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 POLIQ9UNA4 740 aa24■■□□□ 1.43
PDLIM2-203ENST00000339162 SMIM35A0A1B0GVV1 85 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 ZMYND10O75800 440 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 UNGP13051 313 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 HOXA11P31270 313 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 BPIFB4P59827 614 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 ADAM17P78536 824 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 PURAQ00577 322 aaKnown RBP23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 NAA35Q5VZE5 725 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 ADPGKQ9BRR6 497 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 ABCB6Q9NP58 842 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 NPTXRO95502 500 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 PGK1P00558 417 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 ITGB3P05106 788 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 PRKCZQ05513 592 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 TMCO3Q6UWJ1 677 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 ZNF572Q7Z3I7 529 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 TMEM40Q8WWA1 233 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 NUP85Q9BW27 656 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 CISHQ9NSE2 258 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 Q9Y3F1 56 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 HTTP42858 3142 aa23.99■■□□□ 1.43
PDLIM2-203ENST00000339162 TRIP12Q14669 1992 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 THAP12O43422 761 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 LLGL2Q6P1M3 1020 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 UBR7Q8N806 425 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 ACAP3Q96P50 834 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 CNTN6Q9UQ52 1028 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 HES2Q9Y543 173 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 CEP104O60308 925 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 ASPAP45381 313 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 RAP1GAPP47736 663 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 GNASQ5JWF2 1037 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 CC2D1AQ6P1N0 951 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 HES6Q96HZ4 224 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 EIF2AQ9BY44 585 aaKnown RBP23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 ALG6Q9Y672 507 aa23.98■■□□□ 1.43
PDLIM2-203ENST00000339162 CYBAP13498 195 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 MESDQ14696 234 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 WDR72Q3MJ13 1102 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 ZNF677Q86XU0 584 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 C7orf31Q8N865 590 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 HDAC7Q8WUI4 952 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 LRRC1Q9BTT6 524 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 RNF19AQ9NV58 838 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 CNOT8Q9UFF9 292 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 RAB21Q9UL25 225 aa23.97■■□□□ 1.43
PDLIM2-203ENST00000339162 DUSP11O75319 330 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 DARSP14868 501 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 CPNE8Q86YQ8 564 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 ZNF564Q8TBZ8 553 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 GTF3C4Q9UKN8 822 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 MROH7Q68CQ1 1323 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 C17orf102A2RUQ5 167 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 SPDYE4A6NLX3 237 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 MYCNP04198 464 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 CYP1A2P05177 515 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 CDH8P55286 799 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 CXCL17Q6UXB2 119 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 ZNF606Q8WXB4 792 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 ASB7Q9H672 318 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 SNTG2Q9NY99 539 aa23.96■■□□□ 1.43
PDLIM2-203ENST00000339162 CEP350Q5VT06 3117 aa23.95■■□□□ 1.43
PDLIM2-203ENST00000339162 CYP1A1P04798 512 aaPredicted RBP23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 EIF4BP23588 611 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 ZNF132P52740 706 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 TMEM132DQ14C87 1099 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 MFSD14CQ5VZR4 134 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 MCOLN2Q8IZK6 566 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 MMGT1Q8N4V1 131 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 HHIPL1Q96JK4 782 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 PLEKHA4Q9H4M7 779 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 RNF14Q9UBS8 474 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 BRD2P25440 801 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 NSFP46459 744 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 HADHBP55084 474 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms