RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 OR4Q2P0C623 313 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 SRFP11831 508 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 AOC1P19801 751 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 ELF1P32519 619 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 ACOT2P49753 483 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 SCARA3Q6AZY7 606 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 SLC8B1Q6J4K2 584 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 RNF19BQ6ZMZ0 732 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 ZSWIM2Q8NEG5 633 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 LARP4BQ92615 738 aaKnown RBP14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 USP28Q96RU2 1077 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 KXD1Q9BQD3 176 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 PARVGQ9HBI0 331 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 MTMR6Q9Y217 621 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 COL4A3Q01955 1670 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 A0A087X0B3 334 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 A0A0B4J269 797 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 PRRG1O14668 218 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 SYN3O14994 580 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 SPTLC1O15269 473 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 OGTO15294 1046 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 VNN2O95498 520 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 DCNP07585 359 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 RHOP08100 348 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 GJA1P17302 382 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 HOXA9P31269 272 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 CCR2P41597 374 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 GTF2BQ00403 316 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 ADCY1Q08828 1119 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 KCNA1Q09470 495 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 PABPC1LQ4VXU2 614 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 FOXD4L5Q5VV16 416 aaPredicted RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 JADE1Q6IE81 842 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 GPIHBP1Q8IV16 184 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 NPAS3Q8IXF0 933 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 FOXD4L4Q8WXT5 416 aaPredicted RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 NXPE3Q969Y0 559 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 TMEM209Q96SK2 561 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 CORO1BQ9BR76 489 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 MSTO1Q9BUK6 570 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 RPF1Q9H9Y2 349 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 PLEKHA5Q9HAU0 1116 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 TFIP11Q9UBB9 837 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 MRPS23Q9Y3D9 190 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 SRPRBQ9Y5M8 271 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 PIEZO1Q92508 2521 aa14.55□□□□□ -0.08
NUDCD3-201ENST00000338427 USP34Q70CQ2 3546 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 ARHGEF37A1IGU5 675 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 H7C4K7 107 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 HNRNPDLO14979 420 aaKnown RBP14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 SLC26A4O43511 780 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 BMP15O95972 392 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 PIGRP01833 764 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 ADRB2P07550 413 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 ATF2P15336 505 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 CEBPBP17676 345 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 PTPN2P17706 415 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 CD72P21854 359 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 LRPAP1P30533 357 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 SNW1Q13573 536 aaKnown RBP14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 RRAGBQ5VZM2 374 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 TANGO2Q6ICL3 276 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 DSTYKQ6XUX3 929 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 ZNF720Q7Z2F6 126 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 SFR1Q86XK3 245 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 DTWD2Q8NBA8 298 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 FAM84AQ96KN4 292 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 ZSWIM3Q96MP5 696 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 PGLYRP2Q96PD5 576 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 FGFBP2Q9BYJ0 223 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 FOXQ1Q9C009 403 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 CRISPLD1Q9H336 500 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 TBC1D17Q9HA65 648 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 CEP72Q9P209 647 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 CPSF3Q9UKF6 684 aaKnown RBP14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 UBQLN1Q9UMX0 589 aaKnown RBP14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 MTF2Q9Y483 593 aaPredicted RBP14.54□□□□□ -0.08
NUDCD3-201ENST00000338427 H0YCG3 227 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 M0QZQ0 153 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 TBCAO75347 108 aaKnown RBP14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 MOSPD3O75425 235 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 LRG1P02750 347 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 NFICP08651 508 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 WNT7BP56706 349 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 PPP2R3AQ06190 1150 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 SPATA1Q5VX52 437 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 ADALQ6DHV7 355 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 CRELD2Q6UXH1 353 aaPredicted RBP14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 ASCL5Q7RTU5 278 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 FRMD5Q7Z6J6 570 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 TCEAL8Q8IYN2 117 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 APPL2Q8NEU8 664 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 INSL5Q9Y5Q6 135 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 ZFHX2Q9C0A1 2572 aaPredicted RBP14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 CACNA1HO95180 2353 aa14.53□□□□□ -0.08
NUDCD3-201ENST00000338427 DMDP11532 3685 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms