RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TNFAIP3P21580 790 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 VAV2P52735 878 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 SCARA5Q6ZMJ2 495 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 SLC47A2Q86VL8 602 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 ZNF592Q92610 1267 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 JAKMIP2Q96AA8 810 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 C18orf25Q96B23 403 aaPredicted RBP15.77■□□□□ 0.11
CBX3-201ENST00000337620 NIF3L1Q9GZT8 377 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 PCDHB4Q9Y5E5 795 aa15.77■□□□□ 0.11
CBX3-201ENST00000337620 SMIM28A0A1B0GU29 152 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 RCCD1A6NED2 376 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 MGEA5O60502 916 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 ITGA4P13612 1032 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 RBP5P82980 135 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 BMS1Q14692 1282 aaKnown RBP15.76■□□□□ 0.11
CBX3-201ENST00000337620 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 TRAF7Q6Q0C0 670 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 HACE1Q8IYU2 909 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 BEST2Q8NFU1 509 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 CXorf38Q8TB03 319 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 CAGE1Q8TC20 777 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 SLC20A1Q8WUM9 679 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 TAF4BQ92750 862 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 IRX2Q9BZI1 471 aaPredicted RBP15.76■□□□□ 0.11
CBX3-201ENST00000337620 CRISPLD2Q9H0B8 497 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 TRIM10Q9UDY6 481 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 TUBGCP4Q9UGJ1 667 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 SQORQ9Y6N5 450 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 DDX3XO00571 662 aaKnown RBP eCLIP15.76■□□□□ 0.114e-23■■□□□ 12.3
CBX3-201ENST00000337620 CD58P19256 250 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 ACO1P21399 889 aaKnown RBP15.76■□□□□ 0.11
CBX3-201ENST00000337620 ANXA13P27216 316 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 ARHGAP25P42331 645 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 KIF5AQ12840 1032 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 ZBTB6Q15916 424 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 ZNF667Q5HYK9 610 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 TAF3Q5VWG9 929 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 TMEM270Q6UE05 265 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 HPDLQ96IR7 371 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 ADAM2Q99965 735 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 LACRTQ9GZZ8 138 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 LUC7LQ9NQ29 371 aaKnown RBP15.76■□□□□ 0.11
CBX3-201ENST00000337620 NAGPAQ9UK23 515 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 POLIQ9UNA4 740 aa15.76■□□□□ 0.11
CBX3-201ENST00000337620 MEIS3P2A8K0S8 358 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 KRT86O43790 486 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 CD4P01730 458 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 WEE2P0C1S8 567 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 CYP11B1P15538 503 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 ATICP31939 592 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 CTCFP49711 727 aaPredicted RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 PDE6CP51160 858 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 BFSP2Q13515 415 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 MBTPS1Q14703 1052 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 ALKBH5Q6P6C2 394 aaKnown RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 LRRC8DQ7L1W4 858 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 RPUSD2Q8IZ73 545 aaKnown RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 RNF169Q8NCN4 708 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 LNX1Q8TBB1 728 aaPredicted RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 LPPQ93052 612 aa15.75■□□□□ 0.11
CBX3-201ENST00000337620 UBQLN1Q9UMX0 589 aaKnown RBP15.75■□□□□ 0.11
CBX3-201ENST00000337620 RALGAPA2Q2PPJ7 1873 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 KIF2AO00139 706 aaPredicted RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 CALCAP01258 141 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 HSPA1AP0DMV8 641 aaKnown RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 HSPA1BP0DMV9 641 aaKnown RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 KCNE1P15382 129 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 SELPP16109 830 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 GNG11P61952 73 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 DSC3Q14574 896 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 XKR4Q5GH76 650 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 SYT10Q6XYQ8 523 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 SLC39A5Q6ZMH5 540 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 ZFP42Q96MM3 310 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 SYT11Q9BT88 431 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 DUSP10Q9Y6W6 482 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 FAM170AA1A519 330 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 TMCO5BA8MYB1 307 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 TLR3O15455 904 aaKnown RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 XPOTO43592 962 aaKnown RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 KIF5CO60282 957 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 ASPAP45381 313 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 ETF1P62495 437 aaKnown RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 NAB2Q15742 525 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 DNAAF5Q86Y56 855 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 SLC30A5Q8TAD4 765 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 ARMC5Q96C12 935 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 CISHQ9NSE2 258 aa15.74■□□□□ 0.11
CBX3-201ENST00000337620 NOCTQ9UK39 431 aaKnown RBP15.74■□□□□ 0.11
CBX3-201ENST00000337620 MLH1P40692 756 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 RAB27AP51159 221 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 BPIFB4P59827 614 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms