RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 PIRO00625 290 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 PBX3P40426 434 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 SLC11A1P49279 550 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 UBASH3AP57075 661 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 MYL6P60660 151 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 UBXN1Q04323 297 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 NR1I3Q14994 352 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 FILIP1LQ4L180 1135 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 FKBP15Q5T1M5 1219 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 LMO3Q8TAP4 145 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 FAM193BQ96PV7 902 aaPredicted RBP16.3■□□□□ 0.2
CMC1-201ENST00000334841 CRACR2AQ9BSW2 395 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 PI4K2AQ9BTU6 479 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 INTS2Q9H0H0 1204 aaKnown RBP16.3■□□□□ 0.2
CMC1-201ENST00000334841 GRPEL1Q9HAV7 217 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■■■■ 56.3
CMC1-201ENST00000334841 MARCH5Q9NX47 278 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
CMC1-201ENST00000334841 ARHGEF15O94989 841 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 KIF4AO95239 1232 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 ASS1P00966 412 aaKnown RBP16.29■□□□□ 0.2
CMC1-201ENST00000334841 ITGB1P05556 798 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 MYOGP15173 224 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 RPL9P32969 192 aaKnown RBP16.29■□□□□ 0.2
CMC1-201ENST00000334841 OR1G1P47890 313 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 KLK7P49862 253 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 BCAR1P56945 870 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 RBP5P82980 135 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 KCNMA1Q12791 1236 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 TRPC3Q13507 836 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 GSE1Q14687 1217 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 EXOC3L4Q17RC7 722 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 CD300LGQ6UXG3 332 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 TMEM173Q86WV6 379 aaPredicted RBP16.29■□□□□ 0.2
CMC1-201ENST00000334841 LRRC52Q8N7C0 313 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 TMEM175Q9BSA9 504 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
CMC1-201ENST00000334841 PRG3Q9Y2Y8 225 aaPredicted RBP16.29■□□□□ 0.2
CMC1-201ENST00000334841 NRP1O14786 923 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 SPTLC1O15269 473 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 GALTP07902 379 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 SLC9A1P19634 815 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 PON1P27169 355 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 PBX1P40424 430 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 PBX2P40425 430 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 APBA1Q02410 837 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 SYCP1Q15431 976 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 SPOPLQ6IQ16 392 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 DPY19L2P1Q6NXN4 242 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 TRIM65Q6PJ69 517 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 FIBCD1Q8N539 461 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 HASPINQ8TF76 798 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
CMC1-201ENST00000334841 DDX27Q96GQ7 796 aaKnown RBP16.28■□□□□ 0.2
CMC1-201ENST00000334841 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 ZNF560Q96MR9 790 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 ERGIC2Q96RQ1 377 aa16.28■□□□□ 0.2
CMC1-201ENST00000334841 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
CMC1-201ENST00000334841 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
CMC1-201ENST00000334841 TSC2P49815 1807 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 LINC01553A4QN01 128 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 NT5C1B-RDH14C9J2C7 533 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 TMEM189-UBE2V1I3L0A0 370 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 CBFA2T2O43439 604 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 B3GAT3O94766 335 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
CMC1-201ENST00000334841 CA3P07451 260 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 LAG3P18627 525 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 ATICP31939 592 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 TAF6P49848 677 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 NOP14P78316 857 aaKnown RBP16.27■□□□□ 0.2
CMC1-201ENST00000334841 CETN1Q12798 172 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
CMC1-201ENST00000334841 EHBP1Q8NDI1 1231 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 CLP1Q92989 425 aaKnown RBP16.27■□□□□ 0.2
CMC1-201ENST00000334841 ZNF558Q96NG5 402 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 LSM14BQ9BX40 385 aaKnown RBP16.27■□□□□ 0.2
CMC1-201ENST00000334841 TRIM5Q9C035 493 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 VRTNQ9H8Y1 702 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 SIX2Q9NPC8 291 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 PCDHA11Q9Y5I1 949 aa16.27■□□□□ 0.2
CMC1-201ENST00000334841 CEP290O15078 2479 aa16.27■□□□□ 0.19
CMC1-201ENST00000334841 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.26■□□□□ 0.19
CMC1-201ENST00000334841 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.26■□□□□ 0.19
CMC1-201ENST00000334841 A0A1W2PQC6 194 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 CLSTN1O94985 981 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 PNPLA4P41247 253 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 BRCC3P46736 316 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 AARSP49588 968 aaKnown RBP eCLIP16.26■□□□□ 0.19
CMC1-201ENST00000334841 ZNF75DP51815 510 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 LILRA4P59901 499 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 LRMPQ12912 555 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
CMC1-201ENST00000334841 SV2CQ496J9 727 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms