RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 TOMM70O94826 608 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 SEPT2Q15019 361 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 ZSWIM7Q19AV6 140 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 TRMT11Q7Z4G4 463 aaKnown RBP13.28□□□□□ -0.28
KPNA4-201ENST00000334256 RABGGTAQ92696 567 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 NAGPAQ9UK23 515 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 H3BRB1 525 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 NR2F2P24468 414 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 PUDPQ08623 228 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 UBXN2BQ14CS0 331 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 SYT2Q8N9I0 419 aaPredicted RBP13.28□□□□□ -0.28
KPNA4-201ENST00000334256 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 ADGRL1O94910 1474 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 PRODHO43272 600 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 OR6A2O95222 327 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 CHRM3P20309 590 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 LSP1P33241 339 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 MTMR2Q13614 643 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 MCEMP1Q8IX19 187 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 THAP11Q96EK4 314 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 RNF146Q9NTX7 359 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 GABBR1Q9UBS5 961 aa13.28□□□□□ -0.28
KPNA4-201ENST00000334256 GRSF1Q12849 480 aaKnown RBP eCLIP13.27□□□□□ -0.28
KPNA4-201ENST00000334256 TTC39BQ5VTQ0 682 aaPredicted RBP13.27□□□□□ -0.28
KPNA4-201ENST00000334256 CLEC4FQ8N1N0 589 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 TMA16Q96EY4 203 aaKnown RBP13.27□□□□□ -0.28
KPNA4-201ENST00000334256 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 SLITRK1Q96PX8 696 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 GBA2Q9HCG7 927 aaPredicted RBP13.27□□□□□ -0.28
KPNA4-201ENST00000334256 GGA3Q9NZ52 723 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 OTOL1A6NHN0 477 aaPredicted RBP13.27□□□□□ -0.28
KPNA4-201ENST00000334256 CTNNB1P35222 781 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 ACAD9Q9H845 621 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 ADGRF5Q8IZF2 1346 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 SNTNA6NMZ2 147 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 HOXC9P31274 260 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 NLRP12P59046 1061 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 SNX17Q15036 470 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.28
KPNA4-201ENST00000334256 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 RWDD2BP57060 319 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 CDK17Q00537 523 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 PTPAQ15257 358 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 RADILQ96JH8 1075 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 EPYCQ99645 322 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 INTS7Q9NVH2 962 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 RNF103O00237 685 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 AKT2P31751 481 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 CEBPGP53567 150 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 COPS2P61201 443 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 EFHC2Q5JST6 749 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 SRRM1Q8IYB3 904 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 LRRC71Q8N4P6 559 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 OR2W6PQ8NHA6 318 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 TRIT1Q9H3H1 467 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 PIPSLA2A3N6 862 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 MTRF1O75570 445 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 SV2CQ496J9 727 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 PIGKQ92643 395 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 PRMT1Q99873 361 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 MRPL47Q9HD33 250 aaKnown RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.29
KPNA4-201ENST00000334256 SMNDC1O75940 238 aaKnown RBP eCLIP13.27□□□□□ -0.292e-53■■■■■ 36.2
KPNA4-201ENST00000334256 SUN3Q8TAQ9 357 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
KPNA4-201ENST00000334256 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 NOS3P29474 1203 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DSG3P32926 999 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
KPNA4-201ENST00000334256 TPI1P60174 286 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 SCARF1Q14162 830 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 ZNF697Q5TEC3 545 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 CDH24Q86UP0 819 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 HEMGNQ9BXL5 484 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 MYBL1P10243 752 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 HIST2H2ACQ16777 129 aaPredicted RBP13.26□□□□□ -0.29
KPNA4-201ENST00000334256 HIST2H2AA3Q6FI13 130 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 MARK2Q7KZI7 788 aaKnown RBP13.26□□□□□ -0.29
KPNA4-201ENST00000334256 SMYD4Q8IYR2 804 aaPredicted RBP13.26□□□□□ -0.29
KPNA4-201ENST00000334256 ARL10Q8N8L6 244 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 COLEC11Q9BWP8 271 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 MARK1Q9P0L2 795 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 AK5Q9Y6K8 562 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 A0A1B0GW55 424 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DUX4L2P0CJ85 424 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DUX4L3P0CJ86 424 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DUX4L4P0CJ87 422 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DUX4L5P0CJ88 424 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DUX4L6P0CJ89 424 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 DUX4L7P0CJ90 424 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 PID1Q7Z2X4 250 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 KANSL2Q9H9L4 492 aa13.26□□□□□ -0.29
KPNA4-201ENST00000334256 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms