RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 MORC4Q8TE76 937 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 RAPGEF5Q92565 580 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 CLMNQ96JQ2 1002 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 ELP3Q9H9T3 547 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 CNTNAP2Q9UHC6 1331 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 CSDE1O75534 798 aaKnown RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 ATG7O95352 703 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 MCCD1P59942 119 aaPredicted RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 KAZNQ674X7 775 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 LBX2Q6XYB7 198 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 C1orf131Q8NDD1 294 aaKnown RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 KIAA1586Q9HCI6 787 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 H0YCG3 227 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 IRF6O14896 467 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CLTAP09496 248 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 WEE2P0C1S8 567 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 NOMO3P69849 1222 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CLDN10P78369 228 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CLUL1Q15846 466 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 AGBL2Q5U5Z8 902 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 EMC10Q5UCC4 262 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 FSCN2O14926 492 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 ZC3H11AO75152 810 aaKnown RBP eCLIP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 STAM2O75886 525 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CYP1A1P04798 512 aaPredicted RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 DRG2P55039 364 aaKnown RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 MYL6P60660 151 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CENPCQ03188 943 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 IFT88Q13099 833 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CALCOCO2Q13137 446 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CYP1B1Q16678 543 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 RNF187Q5TA31 235 aaPredicted RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 THNSL1Q8IYQ7 743 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 CEP120Q8N960 986 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 RNF149Q8NC42 400 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 COPS5Q92905 334 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 DDX27Q96GQ7 796 aaKnown RBP20.16■□□□□ 0.82
RFTN1-201ENST00000334133 STYXL1Q9Y6J8 313 aa20.16■□□□□ 0.82
RFTN1-201ENST00000334133 TLR3O15455 904 aaKnown RBP20.15■□□□□ 0.82
RFTN1-201ENST00000334133 KRT10P13645 584 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 BRD2P25440 801 aaKnown RBP20.15■□□□□ 0.82
RFTN1-201ENST00000334133 MAGEA9P43362 315 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 MAMLD1Q13495 774 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 LONRF1Q17RB8 773 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 ABRAQ8N0Z2 381 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 TP73O15350 636 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 ADCY2Q08462 1091 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 ORC1Q13415 861 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 CHST13Q8NET6 341 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 DNERQ8NFT8 737 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 CGRRF1Q99675 332 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 SPATC1LQ9H0A9 340 aa20.15■□□□□ 0.82
RFTN1-201ENST00000334133 GMNCA6NCL1 334 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 RGS16O15492 202 aaPredicted RBP20.14■□□□□ 0.82
RFTN1-201ENST00000334133 RIPK2O43353 540 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 ADCY3O60266 1144 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 TFAMQ00059 246 aaKnown RBP20.14■□□□□ 0.82
RFTN1-201ENST00000334133 SLFN12LQ6IEE8 588 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 ART4Q93070 314 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 LRRC19Q9H756 370 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 NRBP2Q9NSY0 501 aa20.14■□□□□ 0.82
RFTN1-201ENST00000334133 BRCA1P38398 1863 aaKnown RBP20.14■□□□□ 0.81
RFTN1-201ENST00000334133 ICAM3P32942 547 aa20.14■□□□□ 0.81
RFTN1-201ENST00000334133 RHPN2Q8IUC4 686 aa20.14■□□□□ 0.81
RFTN1-201ENST00000334133 ZNF606Q8WXB4 792 aa20.14■□□□□ 0.81
RFTN1-201ENST00000334133 NLRP4Q96MN2 994 aa20.14■□□□□ 0.81
RFTN1-201ENST00000334133 A6NNZ2 444 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 PROSCO94903 275 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 FAM107AO95990 144 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 PSMC4P43686 418 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 BPIFB4P59827 614 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 TMEM132AQ24JP5 1023 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 TUBB8Q3ZCM7 444 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 PACS2Q86VP3 889 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 HOOK3Q86VS8 718 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 NIFKQ9BYG3 293 aaKnown RBP20.13■□□□□ 0.81
RFTN1-201ENST00000334133 ADGRA2Q96PE1 1338 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 B4GALT5O43286 388 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 CHN1P15882 459 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 ADCY8P40145 1251 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 FNTAP49354 379 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 EIF3BP55884 814 aaKnown RBP20.13■□□□□ 0.81
RFTN1-201ENST00000334133 IRX3P78415 501 aaPredicted RBP20.13■□□□□ 0.81
RFTN1-201ENST00000334133 TARBP2Q15633 366 aaKnown RBP20.13■□□□□ 0.81
RFTN1-201ENST00000334133 TLCD1Q96CP7 247 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 HAUS1Q96CS2 278 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 CDC42EP4Q9H3Q1 356 aaKnown RBP20.13■□□□□ 0.81
RFTN1-201ENST00000334133 AAASQ9NRG9 546 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 TRAPPC3O43617 180 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 NUDT17P0C025 328 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 IFNAR2P48551 515 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 ITGA8P53708 1063 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 LIN9Q5TKA1 542 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 PLVAPQ9BX97 442 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 TXNRD2Q9NNW7 524 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 AVENQ9NQS1 362 aaPredicted RBP20.13■□□□□ 0.81
RFTN1-201ENST00000334133 CTNNAL1Q9UBT7 734 aa20.13■□□□□ 0.81
RFTN1-201ENST00000334133 IGKV6D-21A0A0A0MT36 114 aa20.12■□□□□ 0.81
RFTN1-201ENST00000334133 CYP4A22Q5TCH4 519 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms